Detail Information

Basic Information:


  VIRBase ID:  

VHID00102182

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H7-5p:           JPH4:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H7-5p JPH4
miRBase
Accession/Entrez ID		 MIMAT0012595 84502
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - JP4//JPHL1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR JPH4
chr14:24044033(-) A-I      intronic
chr14:24043548(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase JPH4
chr14:24040415-24040416(-) m6A CDS       24209618//25456834//24981863//27371828
chr14:24040485-24040486(-) m6A CDS       24209618//25456834//24981863
chr14:24040562-24040563(-) m6A CDS       24209618//25456834//24981863
chr14:24040589-24040590(-) m6A CDS       24209618//25456834//24981863
chr14:24040614-24040615(-) m6A CDS       24209618//25456834//24981863
chr14:24040650-24040651(-) m6A CDS       24209618//25456834
chr14:24040661-24040662(-) m6A CDS       24209618//25456834
chr14:24041036-24041037(-) m6A CDS       24209618
chr14:24041050-24041051(-) m6A CDS       24209618
chr14:24044962-24044963(-) m6A CDS//exon       -
chr14:24045276-24045277(-) m6A CDS//exon       24209618//25456834
chr14:24046298-24046299(-) m6A CDS//exon       24209618//25456834
chr14:24046488-24046489(-) m6A CDS//exon       24209618//25456834//24981863
chr14:24047702-24047703(-) m6A 5'UTR//exon       -
chr14:24047782-24047783(-) m6A 5'UTR       -
chr14:24047920-24047921(-) m6A 5'UTR       -
chr14:24047944-24047945(-) m6A 5'UTR       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate JPH4
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H7-5p
Interactor2: JPH4

Evidence Support:


Prediction-Evidence cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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