Basic Information:

  VIRBase ID:  

VHID00101932

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H7-5p:  MIMAT0012595          ABCG4:  NM_001348192     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H7-5p	ABCG4
miRBase Accession/Entrez ID	MIMAT0012595	64137
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	WHITE2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ABCG4	chr11:119023945(+) A-I      intronic chr11:119022466(+) A-I      intronic chr11:119021406(+) A-I      intronic chr11:119022467(+) A-I      intronic chr11:119021427(+) A-I      intronic chr11:119030013(+) A-I      intronic chr11:119022569(+) A-I      intronic chr11:119023931(+) A-I      intronic chr11:119021436(+) A-I      intronic chr11:119021435(+) A-I      intronic chr11:119023940(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ABCG4	chr11:119031640-119031641(+) m6A CDS       24209618 chr11:119031730-119031731(+) m6A CDS       24209618 chr11:119031878-119031879(+) m6A 3'UTR       25456834 chr11:119031896-119031897(+) m6A 3'UTR       25456834 chr11:119031963-119031964(+) m6A 3'UTR       24284625//24209618//25456834 chr11:119032087-119032088(+) m6A 3'UTR       24284625//25456834 chr11:119032320-119032321(+) m6A 3'UTR       25456834 chr11:119032365-119032366(+) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ABCG4	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H7-5p
Interactor2: ABCG4

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg