Basic Information:

  VIRBase ID:  

VHID00100122

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H7-5p:  MIMAT0012595          DMWD:  NM_004943     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H7-5p	DMWD
miRBase Accession/Entrez ID	MIMAT0012595	1762
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	D19S593E//DMR-N9//DMRN9//gene59

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	DMWD	chr19:46293136(-) A-I      intronic chr19:46293108(-) A-I      intronic chr19:46293134(-) A-I      intronic chr19:46293152(-) A-I      intronic chr19:46293151(-) A-I      intronic chr19:46293143(-) A-I      intronic chr19:46293667(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	DMWD	chr19:46286562-46286563(-) m6A 3'UTR       24284625//25456834//22575960 chr19:46286657-46286658(-) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr19:46286687-46286688(-) m6A 3'UTR       24284625//25456834//24981863//27371828//22575960//22608085 chr19:46286697-46286698(-) m6A 3'UTR       24284625//25456834//24981863//27371828//22575960//22608085 chr19:46286775-46286776(-) m6A 3'UTR       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr19:46286822-46286823(-) m6A 3'UTR       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr19:46286950-46286951(-) m6A 3'UTR       25456834//24981863//27371828 chr19:46287198-46287199(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr19:46287256-46287257(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr19:46287335-46287336(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//22575960//22608085 chr19:46287345-46287346(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//22575960//22608085 chr19:46287390-46287391(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//22575960//22608085 chr19:46287408-46287409(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//22575960//22608085 chr19:46287633-46287634(-) m6A 3'UTR//intron       24284625//27773536 chr19:46287670-46287671(-) m6A 3'UTR//intron       27773536 chr19:46287945-46287946(-) m6A CDS//intron       27371828//27773536 chr19:46287957-46287958(-) m6A CDS//intron       27371828//27773536 chr19:46288517-46288518(-) m6A 3'UTR//intron       27371828//27773536 chr19:46288538-46288539(-) m6A 3'UTR//intron       27371828//27773536 chr19:46288699-46288700(-) m6A CDS//intron       25456834//24981863//27773535 chr19:46288811-46288812(-) m6A CDS//intron       25456834//24981863//27773536 chr19:46288821-46288822(-) m6A CDS//intron       25456834//24981863//27773536 chr19:46288912-46288913(-) m6A CDS       24284625//27371828//27773536//22575960 chr19:46289032-46289033(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr19:46289155-46289156(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27371828//27773536//22575960//22608085 chr19:46289422-46289423(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr19:46289443-46289444(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr19:46290113-46290114(-) m6A CDS//exon       24284625//25456834//27773535//27371828//22575960 chr19:46290200-46290201(-) m6A exon//intron       25456834 chr19:46290261-46290262(-) m6A exon//intron       25456834//24981863 chr19:46290378-46290379(-) m6A exon//intron       24284625//25456834//24981863 chr19:46290401-46290402(-) m6A exon//intron       24284625//25456834//24981863 chr19:46290421-46290422(-) m6A exon//intron       24284625//25456834//24981863 chr19:46290436-46290437(-) m6A exon//intron       24284625//25456834//24981863 chr19:46290468-46290469(-) m6A exon//intron       25456834//24981863 chr19:46292554-46292555(-) m6A 3'UTR//intron       25456834//24981863 chr19:46292648-46292649(-) m6A CDS//intron       27773535 chr19:46292743-46292744(-) m6A CDS//exon//intron       24981863//27773535 chr19:46292905-46292906(-) m6A exon//intron       24981863//27773535//22608085 chr19:46294054-46294055(-) m6A CDS//intron       25456834//24981863 chr19:46294079-46294080(-) m6A CDS//intron       24284625//25456834//24981863//22608085 chr19:46294187-46294188(-) m6A CDS//exon       24284625//27773535 chr19:46294251-46294252(-) m6A CDS//exon       24284625//27773535 chr19:46295643-46295644(-) m6A CDS//exon       24284625//27773535//27773536 chr19:46295700-46295701(-) m6A CDS//exon       24284625//27773536 chr19:46295756-46295757(-) m6A CDS//exon       27773536 chr19:46295860-46295861(-) m6A CDS//exon       24209618//27371828//27773536//22575960 chr19:46295961-46295962(-) m6A CDS//exon       27371828//27773536//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	DMWD	Chromatin K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     - Ribosome-free cytosol Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H7-5p
Interactor2: DMWD

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg