Basic Information:

  VIRBase ID:  

VHID00100052

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H7-5p:  MIMAT0012595          CFL1:  NM_005507     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H7-5p	CFL1
miRBase Accession/Entrez ID	MIMAT0012595	1072
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CFL//cofilin//HEL-S-15

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CFL1	chr11:65622237-65622238(-) m6A 3'UTR//intron       - chr11:65622246-65622247(-) m6A 3'UTR//intron       - chr11:65622293-65622294(-) m6A 3'UTR//intron       22575960 chr11:65622316-65622317(-) m6A 3'UTR//exon//intron       22575960 chr11:65622327-65622328(-) m6A 3'UTR//exon//intron       22575960 chr11:65622561-65622562(-) m6A 3'UTR//exon//intron       27773535//22575960 chr11:65622600-65622601(-) m6A 3'UTR//exon//intron       27773535//27773536//22575960 chr11:65622664-65622665(-) m6A 3'UTR//exon//intron       24284625//27773535//27773536//22575960 chr11:65622724-65622725(-) m6A 3'UTR//exon//intron       24284625//27773535//27773536//22575960 chr11:65622873-65622874(-) m6A CDS//exon//intron       24284625//27773535//27773536//22575960 chr11:65622894-65622895(-) m6A CDS//exon//intron       24284625//27773535//27773536 chr11:65622973-65622974(-) m6A exon//intron       24284625 chr11:65623286-65623287(-) m6A exon//intron       24284625//27773535 chr11:65623350-65623351(-) m6A exon//intron       24284625//27773535//22575960 chr11:65623445-65623446(-) m6A CDS//exon//intron       24284625//26404942//27773535//27371828//22575960 chr11:65623448-65623449(-) Gm CDS//exon//intron       - chr11:65623480-65623481(-) m6A CDS//exon//intron       24284625//26404942//27773535//27371828//22575960 chr11:65623529-65623530(-) m6A CDS//exon//intron       24284625//26404942//27773535//27371828//27773536//22575960 chr11:65623579-65623580(-) m6A CDS//exon//intron       24284625//26404942//27773535//27371828//27773536//22575960 chr11:65623588-65623589(-) m6A CDS//exon//intron       24284625//26404942//27773535//27371828//27773536//22575960 chr11:65623625-65623626(-) m1A CDS//exon//intron       26863196//26863410 chr11:65623768-65623769(-) m6A 5'UTR//intron       22575960 chr11:65623787-65623788(-) m6A 5'UTR//intron       - chr11:65623835-65623836(-) m6A 5'UTR//intron       - chr11:65624383-65624384(-) m6A 5'UTR//intron       24981863 chr11:65624463-65624464(-) m6A 5'UTR//intron       24981863 chr11:65625204-65625205(-) m6A 5'UTR//intron       27773536 chr11:65625320-65625321(-) m6A 5'UTR//intron       24284625//22575960 chr11:65625571-65625572(-) m6A 5'UTR//exon//intron       24284625//24981863//27371828//22575960 chr11:65625747-65625748(-) m6A 5'UTR//intron       24981863//27371828 chr11:65625790-65625791(-) m6A 5'UTR//intron       24981863//27371828 chr11:65625845-65625846(-) m6A 5'UTR//intron       24981863 chr11:65626845-65626846(-) m6A 5'UTR//intron       24981863 chr11:65628730-65628731(-) m6A CDS//intron       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CFL1	Exosome Blood     - Lamellipodium Lung carcinoma cells (H1299)     25908858 Nucleolus K562 cells     - Nucleus HeLa-S3 cells|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H7-5p
Interactor2: CFL1

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg