Detail Information

Basic Information:


  VIRBase ID:  

VHID00100050

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H7-5p:           CDSN:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H7-5p CDSN
miRBase
Accession/Entrez ID
MIMAT0012595 1041
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - HTSS//HTSS1//HYPT2//PSS//PSS1//S

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CDSN
chr6:31084224-31084225(-) m6A CDS       24209618//25456834
chr6:31084271-31084272(-) m6A CDS       24209618
chr6:31084618-31084619(-) m6A CDS       -
chr6:31084729-31084730(-) m6A CDS       -
chr6:31084790-31084791(-) m6A CDS       -
chr6:31084812-31084813(-) m6A CDS       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate CDSN
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H7-5p
Interactor2: CDSN

Evidence Support:


Prediction-Evidence cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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