Basic Information:

  VIRBase ID:  

VHID00098816

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H6-3p:  MIMAT0008404          NIBAN2:  NM_001035534     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H6-3p	NIBAN2
miRBase Accession/Entrez ID	MIMAT0008404	64855
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	bA356B19.6//C9orf88//FAM129B//MEG-3//MINERVA//OC58

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NIBAN2	chr9:130325934(-) A-I      intronic chr9:130316159(-) A-I      intronic chr9:130335202(-) A-I      intronic chr9:130333731(-) A-I      intronic chr9:130328349(-) A-I      intronic chr9:130325966(-) A-I      intronic chr9:130281266(-) A-I      intronic chr9:130278706(-) A-I      intronic chr9:130272792(-) A-I      intronic chr9:130272827(-) A-I      intronic chr9:130272854(-) A-I      intronic chr9:130272895(-) A-I      intronic chr9:130338036(-) A-I      intronic chr9:130327030(-) A-I      intronic chr9:130327028(-) A-I      intronic chr9:130278596(-) A-I      intronic chr9:130325930(-) A-I      intronic chr9:130325910(-) A-I      intronic chr9:130317061(-) A-I      intronic chr9:130316887(-) A-I      intronic chr9:130316140(-) A-I      intronic chr9:130316135(-) A-I      intronic chr9:130316133(-) A-I      intronic chr9:130316127(-) A-I      intronic chr9:130316092(-) A-I      intronic chr9:130316087(-) A-I      intronic chr9:130315244(-) A-I      intronic chr9:130313438(-) A-I      intronic chr9:130309713(-) A-I      intronic chr9:130294833(-) A-I      intronic chr9:130315252(-) A-I      intronic chr9:130282632(-) A-I      intronic chr9:130278794(-) A-I      intronic chr9:130278768(-) A-I      intronic chr9:130278765(-) A-I      intronic chr9:130274838(-) A-I      intronic chr9:130278582(-) A-I      intronic chr9:130277501(-) A-I      intronic chr9:130276426(-) A-I      intronic chr9:130276385(-) A-I      intronic chr9:130276382(-) A-I      intronic chr9:130276379(-) A-I      intronic chr9:130276378(-) A-I      intronic chr9:130273600(-) A-I      intronic chr9:130273599(-) A-I      intronic chr9:130273540(-) A-I      intronic chr9:130273531(-) A-I      intronic chr9:130273462(-) A-I      intronic chr9:130273461(-) A-I      intronic chr9:130277606(-) A-I      intronic chr9:130277618(-) A-I      intronic chr9:130277626(-) A-I      intronic chr9:130316155(-) A-I      intronic chr9:130315166(-) A-I      intronic chr9:130273409(-) A-I      intronic chr9:130274845(-) A-I      intronic chr9:130277454(-) A-I      intronic chr9:130273429(-) A-I      intronic chr9:130273520(-) A-I      intronic chr9:130278744(-) A-I      intronic chr9:130316067(-) A-I      intronic chr9:130341068(-) A-I      intronic chr9:130341084(-) A-I      intronic chr9:130334374(-) A-I      intronic chr9:130277543(-) A-I      intronic chr9:130282950(-) A-I      intronic chr9:130313402(-) A-I      intronic chr9:130277419(-) A-I      intronic chr9:130273378(-) A-I      intronic chr9:130278741(-) A-I      intronic chr9:130278069(-) A-I      intronic chr9:130282789(-) A-I      intronic chr9:130278376(-) A-I      intronic chr9:130273602(-) A-I      intronic chr9:130328122(-) A-I      intronic chr9:130316972(-) A-I      intronic chr9:130337778(-) A-I      intronic chr9:130278745(-) A-I      intronic chr9:130273521(-) A-I      intronic chr9:130334488(-) A-I      intronic chr9:130336131(-) A-I      intronic chr9:130341086(-) A-I      intronic chr9:130273090(-) A-I      intronic chr9:130314800(-) A-I      intronic chr9:130273126(-) A-I      intronic chr9:130325996(-) A-I      intronic chr9:130274650(-) A-I      intronic chr9:130277500(-) A-I      intronic chr9:130273680(-) A-I      intronic chr9:130277199(-) A-I      intronic chr9:130313442(-) A-I      intronic chr9:130277610(-) A-I      intronic chr9:130277410(-) A-I      intronic chr9:130316923(-) A-I      intronic chr9:130277470(-) A-I      intronic chr9:130315170(-) A-I      intronic chr9:130277554(-) A-I      intronic

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NIBAN2	Chromatin K562 cells     - Cytosol K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H6-3p
Interactor2: NIBAN2

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg