Detail Information

Basic Information:


  VIRBase ID:  

VHID00098592

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H6-3p:           OTUD7B:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H6-3p OTUD7B
miRBase
Accession/Entrez ID		 MIMAT0008404 56957
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - CEZANNE//ZA20D1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR OTUD7B
chr1:149931009(-) A-I      intronic
chr1:149930438(-) A-I      intronic
chr1:149947870(-) A-I      intronic
chr1:149913700(-) A-I      3'UTR
chr1:149913733(-) A-I      3'UTR
chr1:149913740(-) A-I      3'UTR
chr1:149913741(-) A-I      3'UTR
chr1:149913749(-) A-I      3'UTR
chr1:149913752(-) A-I      3'UTR
chr1:149913760(-) A-I      3'UTR
chr1:149976976(-) A-I      intronic
chr1:149976967(-) A-I      intronic
chr1:149976935(-) A-I      intronic
chr1:149976922(-) A-I      intronic
chr1:149976917(-) A-I      intronic
chr1:149976913(-) A-I      intronic
chr1:149976903(-) A-I      intronic
chr1:149964643(-) A-I      intronic
chr1:149964634(-) A-I      intronic
chr1:149964629(-) A-I      intronic
chr1:149964619(-) A-I      intronic
chr1:149964589(-) A-I      intronic
chr1:149964588(-) A-I      intronic
chr1:149964587(-) A-I      intronic
chr1:149964564(-) A-I      intronic
chr1:149964517(-) A-I      intronic
chr1:149964516(-) A-I      intronic
chr1:149964492(-) A-I      intronic
chr1:149947852(-) A-I      intronic
chr1:149947828(-) A-I      intronic
chr1:149936844(-) A-I      intronic
chr1:149976957(-) A-I      intronic
chr1:149936867(-) A-I      intronic
chr1:149964066(-) A-I      intronic
chr1:149948974(-) A-I      intronic
chr1:149936862(-) A-I      intronic
chr1:149966497(-) A-I      intronic
chr1:149948956(-) A-I      intronic
chr1:149948944(-) A-I      intronic
chr1:149936849(-) A-I      intronic
chr1:149936848(-) A-I      intronic
chr1:149936845(-) A-I      intronic
chr1:149922705(-) A-I      intronic
chr1:149948937(-) A-I      intronic
chr1:149947876(-) A-I      intronic
chr1:149947830(-) A-I      intronic
chr1:149946674(-) A-I      intronic
chr1:149931241(-) A-I      intronic
chr1:149931132(-) A-I      intronic
chr1:149930882(-) A-I      intronic
chr1:149946537(-) A-I      intronic
chr1:149946132(-) A-I      intronic
chr1:149946054(-) A-I      intronic
chr1:149922703(-) A-I      intronic
chr1:149945923(-) A-I      intronic
chr1:149976971(-) A-I      intronic
chr1:149966634(-) A-I      intronic
chr1:149930880(-) A-I      intronic
chr1:149945849(-) A-I      intronic
chr1:149930496(-) A-I      intronic
chr1:149945537(-) A-I      intronic
chr1:149922698(-) A-I      intronic
chr1:149945525(-) A-I      intronic
chr1:149930358(-) A-I      intronic
chr1:149964109(-) A-I      intronic
chr1:149945330(-) A-I      intronic
chr1:149947892(-) A-I      intronic
chr1:149945322(-) A-I      intronic
chr1:149930348(-) A-I      intronic
chr1:149964525(-) A-I      intronic
chr1:149942526(-) A-I      intronic
chr1:149930331(-) A-I      intronic
chr1:149942411(-) A-I      intronic
chr1:149964544(-) A-I      intronic
chr1:149964541(-) A-I      intronic
chr1:149930310(-) A-I      intronic
chr1:149930300(-) A-I      intronic
chr1:149942384(-) A-I      intronic
chr1:149941806(-) A-I      intronic
chr1:149941476(-) A-I      intronic
chr1:149940845(-) A-I      intronic
chr1:149966694(-) A-I      intronic
chr1:149940698(-) A-I      intronic
chr1:149964609(-) A-I      intronic
chr1:149964610(-) A-I      intronic
chr1:149930295(-) A-I      intronic
chr1:149964983(-) A-I      intronic
chr1:149966416(-) A-I      intronic
chr1:149976885(-) A-I      intronic
chr1:149976886(-) A-I      intronic
chr1:149930235(-) A-I      intronic
chr1:149964084(-) A-I      intronic
chr1:149937068(-) A-I      intronic
chr1:149940102(-) A-I      intronic
chr1:149930426(-) A-I      intronic
chr1:149930290(-) A-I      intronic
chr1:149940762(-) A-I      intronic
chr1:149940734(-) A-I      intronic
chr1:149957268(-) A-I      intronic
chr1:149931257(-) A-I      intronic
chr1:149920316(-) A-I      intronic
chr1:149964054(-) A-I      intronic
chr1:149931242(-) A-I      intronic
chr1:149941515(-) A-I      intronic
chr1:149965012(-) A-I      intronic
chr1:149930801(-) A-I      intronic
chr1:149930437(-) A-I      intronic
chr1:149964611(-) A-I      intronic
chr1:149976425(-) A-I      intronic
chr1:149922839(-) A-I      intronic
chr1:149946673(-) A-I      intronic
chr1:149945275(-) A-I      intronic
chr1:149964566(-) A-I      intronic
chr1:149946644(-) A-I      intronic
chr1:149945220(-) A-I      intronic
chr1:149930501(-) A-I      intronic
chr1:149930840(-) A-I      intronic
chr1:149941006(-) A-I      intronic
chr1:149946901(-) A-I      intronic
chr1:149945319(-) A-I      intronic
chr1:149964042(-) A-I      intronic
chr1:149976528(-) A-I      intronic
chr1:149940142(-) A-I      intronic
chr1:149946141(-) A-I      intronic
chr1:149946612(-) A-I      intronic
chr1:149941445(-) A-I      intronic
chr1:149941908(-) A-I      intronic
chr1:149945240(-) A-I      intronic
chr1:149931075(-) A-I      intronic
chr1:149964012(-) A-I      intronic
chr1:149957589(-) A-I      intronic
chr1:149946824(-) A-I      intronic
chr1:149941033(-) A-I      intronic
chr1:149930339(-) A-I      intronic
chr1:149930670(-) A-I      intronic
chr1:149945924(-) A-I      intronic
chr1:149954780(-) A-I      intronic
chr1:149965043(-) A-I      intronic
chr1:149976445(-) A-I      intronic
chr1:149941457(-) A-I      intronic
chr1:149964590(-) A-I      intronic
chr1:149954461(-) A-I      intronic
chr1:149946070(-) A-I      intronic
chr1:149940844(-) A-I      intronic
chr1:149918476(-) A-I      intronic
chr1:149963920(-) A-I      intronic
chr1:149941520(-) A-I      intronic
chr1:149930758(-) A-I      intronic
chr1:149946109(-) A-I      intronic
chr1:149913802(-) A-I      3'UTR
chr1:149923287(-) A-I      intronic
chr1:149966720(-) A-I      intronic
chr1:149930417(-) A-I      intronic
chr1:149941174(-) A-I      intronic
chr1:149955062(-) A-I      intronic
chr1:149964522(-) A-I      intronic
chr1:149913522(-) A-I      3'UTR
chr1:149913731(-) A-I      3'UTR
chr1:149941142(-) A-I      intronic
chr1:149913726(-) A-I      3'UTR
chr1:149913459(-) A-I      3'UTR
chr1:149930420(-) A-I      intronic
chr1:149913720(-) A-I      3'UTR
chr1:149913727(-) A-I      3'UTR
chr1:149913513(-) A-I      3'UTR
chr1:149940026(-) A-I      intronic
chr1:149923304(-) A-I      intronic
chr1:149941458(-) A-I      intronic
chr1:149948513(-) A-I      intronic
chr1:149945918(-) A-I      intronic
chr1:149913436(-) A-I      3'UTR
chr1:149964632(-) A-I      intronic
chr1:149913732(-) A-I      3'UTR
chr1:149945991(-) A-I      intronic
chr1:149966442(-) A-I      intronic
chr1:149931039(-) A-I      intronic
chr1:149976816(-) A-I      intronic
chr1:149931184(-) A-I      intronic
chr1:149940746(-) A-I      intronic
chr1:149922725(-) A-I      intronic
chr1:149945300(-) A-I      intronic
chr1:149964584(-) A-I      intronic
chr1:149931031(-) A-I      intronic
chr1:149941193(-) A-I      intronic
chr1:149964688(-) A-I      intronic
chr1:149964044(-) A-I      intronic
chr1:149920081(-) A-I      intronic
chr1:149930419(-) A-I      intronic
chr1:149930407(-) A-I      intronic
chr1:149930502(-) A-I      intronic
chr1:149945269(-) A-I      intronic
chr1:149930776(-) A-I      intronic
chr1:149976524(-) A-I      intronic
chr1:149937069(-) A-I      intronic
chr1:149930973(-) A-I      intronic
chr1:149946133(-) A-I      intronic
chr1:149964640(-) A-I      intronic
chr1:149964838(-) A-I      intronic
chr1:149930879(-) A-I      intronic
chr1:149931015(-) A-I      intronic
chr1:149946618(-) A-I      intronic
chr1:149940094(-) A-I      intronic
chr1:149945295(-) A-I      intronic
chr1:149940994(-) A-I      intronic
chr1:149946547(-) A-I      intronic
chr1:149940766(-) A-I      intronic
chr1:149941537(-) A-I      intronic
chr1:149937192(-) A-I      intronic
chr1:149963914(-) A-I      intronic
chr1:149940089(-) A-I      intronic
chr1:149946578(-) A-I      intronic
chr1:149953893(-) A-I      intronic
chr1:149964548(-) A-I      intronic
chr1:149953915(-) A-I      intronic
chr1:149966624(-) A-I      intronic
chr1:149976520(-) A-I      intronic
chr1:149964557(-) A-I      intronic
chr1:149964971(-) A-I      intronic
chr1:149964558(-) A-I      intronic
chr1:149941190(-) A-I      intronic
chr1:149966449(-) A-I      intronic
chr1:149964878(-) A-I      intronic
chr1:149964025(-) A-I      intronic
chr1:149930335(-) A-I      intronic
chr1:149964114(-) A-I      intronic
chr1:149941058(-) A-I      intronic
chr1:149966425(-) A-I      intronic
chr1:149930380(-) A-I      intronic
chr1:149930340(-) A-I      intronic
chr1:149976874(-) A-I      intronic
chr1:149942443(-) A-I      intronic
chr1:149964560(-) A-I      intronic
chr1:149953826(-) A-I      intronic
chr1:149931055(-) A-I      intronic
chr1:149936943(-) A-I      intronic
chr1:149941512(-) A-I      intronic
chr1:149966417(-) A-I      intronic
chr1:149964883(-) A-I      intronic
chr1:149930381(-) A-I      intronic
chr1:149966672(-) A-I      intronic
chr1:149931017(-) A-I      intronic
chr1:149964535(-) A-I      intronic
chr1:149947869(-) A-I      intronic
chr1:149964973(-) A-I      intronic
chr1:149965059(-) A-I      intronic
chr1:149945236(-) A-I      intronic
chr1:149976948(-) A-I      intronic
chr1:149976949(-) A-I      intronic
chr1:149945230(-) A-I      intronic
chr1:149954910(-) A-I      intronic
chr1:149946707(-) A-I      intronic
chr1:149920021(-) A-I      intronic
chr1:149965013(-) A-I      intronic
chr1:149931056(-) A-I      intronic
chr1:149966680(-) A-I      intronic
chr1:149946902(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED OTUD7B
chr1:149913513(-) A-I exon 3'UTR    21960545   //22327324
chr1:149913726(-) A-I exon 3'UTR    21960545   //22327324
chr1:149913727(-) A-I exon 3'UTR    21960545   //22327324
chr1:149913720(-) A-I exon 3'UTR    21960545
chr1:149913727(-) A-G exon 3'UTR    21725310   //22484847
chr1:149913513(-) A-G exon 3'UTR    22484847
chr1:149922706(-) G-A intron -    22484847
chr1:149930746(-) C-T intron -    22484847
chr1:149931039(-) A-G intron -    22484847
chr1:149931055(-) A-G intron -    22484847
chr1:149931075(-) A-G intron -    22484847
chr1:149931257(-) A-G intron -    22484847
chr1:149933464(-) T-C intron -    22484847
chr1:149937069(-) A-G intron -    22484847
chr1:149937192(-) A-G intron -    22484847
chr1:149940026(-) A-G intron -    22484847
chr1:149940089(-) A-G intron -    22484847
chr1:149940094(-) A-G intron -    22484847
chr1:149940102(-) A-G intron -    22484847
chr1:149940142(-) A-G intron -    22484847
chr1:149940734(-) A-G intron -    22484847
chr1:149940762(-) A-G intron -    22484847
chr1:149940766(-) A-G intron -    22484847
chr1:149941174(-) A-G intron -    22484847
chr1:149941190(-) A-G intron -    22484847
chr1:149941512(-) A-G intron -    22484847
chr1:149941520(-) A-G intron -    22484847
chr1:149941908(-) A-G intron -    22484847
chr1:149945230(-) A-G intron -    22484847
chr1:149945295(-) A-G intron -    22484847
chr1:149947869(-) A-G intron -    22484847
chr1:149952952(-) G-T intron -    22484847
chr1:149964042(-) A-G intron -    22484847
chr1:149964044(-) A-G intron -    22484847
chr1:149964054(-) A-G intron -    22484847
chr1:149964114(-) A-G intron -    22484847
chr1:149964522(-) A-G intron -    22484847
chr1:149964535(-) A-G intron -    22484847
chr1:149964558(-) A-G intron -    22484847
chr1:149964971(-) A-G intron -    22484847
chr1:149964973(-) A-G intron -    22484847
chr1:149964995(-) A-G intron -    22484847
chr1:149965012(-) A-G intron -    22484847
chr1:149965013(-) A-G intron -    22484847
chr1:149965043(-) A-G intron -    22484847
chr1:149965059(-) A-G intron -    22484847
chr1:149966417(-) A-G intron -    22484847
chr1:149966425(-) A-G intron -    22484847
chr1:149966442(-) A-G intron -    22484847
chr1:149966449(-) A-G intron -    22484847
chr1:149966680(-) A-G intron -    22484847
chr1:149976874(-) A-G intron -    22484847
chr1:149976948(-) A-G intron -    22484847
chr1:149976949(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase OTUD7B
chr1:149909842-149909843(-) m6A 3'UTR       24284625
chr1:149909849-149909850(-) m6A 3'UTR       24284625
chr1:149912564-149912565(-) m6A 3'UTR       27773535
chr1:149913611-149913612(-) m6A 3'UTR       24981863
chr1:149914511-149914512(-) m6A 3'UTR       27773535
chr1:149914523-149914524(-) m6A 3'UTR       27773535
chr1:149914631-149914632(-) m6A 3'UTR       27773535
chr1:149914704-149914705(-) m6A 3'UTR       27773535
chr1:149914720-149914721(-) m6A 3'UTR       27773535
chr1:149915289-149915290(-) m6A 3'UTR       24981863//27773535
chr1:149915359-149915360(-) m6A 3'UTR       24209618//24981863//27773535
chr1:149915458-149915459(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535
chr1:149915630-149915631(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:149915688-149915689(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:149915722-149915723(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:149915745-149915746(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr1:149915788-149915789(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr1:149915809-149915810(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr1:149915844-149915845(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr1:149915854-149915855(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr1:149915870-149915871(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr1:149915878-149915879(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr1:149915889-149915890(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr1:149916013-149916014(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr1:149916056-149916057(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr1:149916091-149916092(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr1:149916157-149916158(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr1:149916203-149916204(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr1:149916361-149916362(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr1:149916447-149916448(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22608085
chr1:149916486-149916487(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22608085
chr1:149916626-149916627(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr1:149916636-149916637(-) m1A CDS       26863196
chr1:149916648-149916649(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr1:149916678-149916679(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr1:149916728-149916729(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr1:149916753-149916754(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr1:149916772-149916773(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr1:149916803-149916804(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr1:149916818-149916819(-) Gm CDS       -
chr1:149916884-149916885(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr1:149916890-149916891(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//27773536//22608085
chr1:149920927-149920928(-) m6A CDS       24284625
chr1:149921535-149921536(-) m6A CDS       24284625
chr1:149922010-149922011(-) m6A CDS       24284625
chr1:149922025-149922026(-) m6A CDS       24284625
chr1:149931643-149931644(-) m6A CDS       24209618//22575960
chr1:149931667-149931668(-) m6A CDS       24209618//27773535//22575960
chr1:149932877-149932878(-) m6A exon//intron       24981863//27773535
chr1:149932946-149932947(-) m6A exon//intron       27773535
chr1:149933058-149933059(-) m6A exon//intron       27773535
chr1:149933079-149933080(-) m6A exon//intron       27773535
chr1:149933100-149933101(-) m6A exon//intron       27773535
chr1:149933109-149933110(-) m6A exon//intron       27773535
chr1:149936163-149936164(-) m6A CDS//exon       27773535
chr1:149936249-149936250(-) m6A CDS//exon       27773535
chr1:149937727-149937728(-) m6A CDS//exon       27773535
chr1:149943071-149943072(-) m6A CDS//exon       24284625//27773535
chr1:149943112-149943113(-) m6A CDS//exon       27773535
chr1:149943138-149943139(-) m6A CDS//exon       27773535
chr1:149949434-149949435(-) m6A CDS       24284625
chr1:149982484-149982485(-) m6A 5'UTR//intron       24284625//27371828//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate OTUD7B
Chromatin K562 cells     -
Cytosol K562 cells     -
Exosome Blood     -
Insoluble cytoplasm HCC cell line (HepG2)     -
Membrane K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H6-3p
Interactor2: OTUD7B

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//Rep//Targetscan
Support Database RepTar//VmiReg

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