Basic Information:

  VIRBase ID:  

VHID00098188

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H6-3p:  MIMAT0008404          EHD3:  NM_014600     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H6-3p	EHD3
miRBase Accession/Entrez ID	MIMAT0008404	30845
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	PAST3

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	EHD3	chr2:31487574(+) A-I      intronic chr2:31487537(+) A-I      intronic chr2:31487535(+) A-I      intronic chr2:31487575(+) A-I      intronic chr2:31473213(+) A-I      intronic chr2:31460505(+) A-I      intronic chr2:31473308(+) A-I      intronic chr2:31473317(+) A-I      intronic chr2:31465942(+) A-I      intronic chr2:31483030(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	EHD3	chr2:31457410-31457411(+) m6A 5'UTR       25456834 chr2:31457424-31457425(+) m6A 5'UTR       25456834 chr2:31457527-31457528(+) m6A CDS       25456834//24981863 chr2:31457567-31457568(+) m6A CDS       25456834 chr2:31483697-31483698(+) m6A CDS       - chr2:31483702-31483703(+) m6A CDS       - chr2:31483714-31483715(+) m6A CDS       - chr2:31484472-31484473(+) m6A CDS       - chr2:31484553-31484554(+) m6A CDS       24209618//24981863 chr2:31489061-31489062(+) m6A CDS       24209618//25456834//24981863//22575960//22608085 chr2:31489292-31489293(+) m6A CDS       24209618//25456834//24981863 chr2:31489582-31489583(+) m6A 3'UTR//CDS       24209618//24981863 chr2:31489661-31489662(+) m6A 3'UTR       24209618//24981863 chr2:31489713-31489714(+) m6A 3'UTR       24209618 chr2:31489953-31489954(+) m6A 3'UTR       24981863//22608085 chr2:31489969-31489970(+) m6A 3'UTR       24981863//22608085 chr2:31490565-31490566(+) m6A 3'UTR       24981863//22608085 chr2:31490628-31490629(+) m6A 3'UTR       25456834//24981863//22608085 chr2:31490638-31490639(+) m6A 3'UTR       25456834//24981863//22608085 chr2:31490675-31490676(+) m6A 3'UTR       24209618//25456834//24981863//22575960//22608085 chr2:31490752-31490753(+) m6A 3'UTR       24209618//25456834//24981863//22575960//22608085 chr2:31490795-31490796(+) m6A 3'UTR       24209618//24981863//22608085 chr2:31490926-31490927(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	EHD3	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H6-3p
Interactor2: EHD3

Evidence Support:

Prediction-Evidence	miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg