Basic Information:

  VIRBase ID:  

VHID00097944

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H6-3p:  MIMAT0008404          KIF13B:  NM_015254     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H6-3p	KIF13B
miRBase Accession/Entrez ID	MIMAT0008404	23303
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	GAKIN

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	KIF13B	chr8:28946790(-) A-I      intronic chr8:28965272(-) A-I      intronic chr8:28965174(-) A-I      intronic chr8:28964937(-) A-I      intronic chr8:28964879(-) A-I      intronic chr8:28965280(-) A-I      intronic chr8:28965282(-) A-I      intronic chr8:28972911(-) A-I      intronic chr8:28972968(-) A-I      intronic chr8:28973605(-) A-I      intronic chr8:28964073(-) A-I      intronic chr8:28964066(-) A-I      intronic chr8:28963966(-) A-I      intronic chr8:28973864(-) A-I      intronic chr8:28973924(-) A-I      intronic chr8:28992750(-) A-I      intronic chr8:28992781(-) A-I      intronic chr8:28992799(-) A-I      intronic chr8:28992837(-) A-I      intronic chr8:28993246(-) A-I      intronic chr8:28993249(-) A-I      intronic chr8:28993255(-) A-I      intronic chr8:28993284(-) A-I      intronic chr8:28963937(-) A-I      intronic chr8:28963892(-) A-I      intronic chr8:28958085(-) A-I      intronic chr8:28957168(-) A-I      intronic chr8:28954010(-) A-I      intronic chr8:28940537(-) A-I      intronic chr8:28940534(-) A-I      intronic chr8:28953859(-) A-I      intronic chr8:28953575(-) A-I      intronic chr8:28965274(-) A-I      intronic chr8:28953251(-) A-I      intronic chr8:28953246(-) A-I      intronic chr8:28953118(-) A-I      intronic chr8:28948529(-) A-I      intronic chr8:28993290(-) A-I      intronic chr8:28993303(-) A-I      intronic chr8:28994481(-) A-I      intronic chr8:28994487(-) A-I      intronic chr8:28994497(-) A-I      intronic chr8:28994546(-) A-I      intronic chr8:28994584(-) A-I      intronic chr8:28995770(-) A-I      intronic chr8:29000208(-) A-I      intronic chr8:29000270(-) A-I      intronic chr8:29000467(-) A-I      intronic chr8:29001239(-) A-I      intronic chr8:29001912(-) A-I      intronic chr8:29001913(-) A-I      intronic chr8:29029386(-) A-I      intronic chr8:29029412(-) A-I      intronic chr8:28948508(-) A-I      intronic chr8:29029468(-) A-I      intronic chr8:29030528(-) A-I      intronic chr8:29030551(-) A-I      intronic chr8:29030633(-) A-I      intronic chr8:29030635(-) A-I      intronic chr8:29051486(-) A-I      intronic chr8:29061262(-) A-I      intronic chr8:29061289(-) A-I      intronic chr8:29061299(-) A-I      intronic chr8:29061325(-) A-I      intronic chr8:29062571(-) A-I      intronic chr8:29073097(-) A-I      intronic chr8:29073931(-) A-I      intronic chr8:29074033(-) A-I      intronic chr8:28948448(-) A-I      intronic chr8:28948387(-) A-I      intronic chr8:28940563(-) A-I      intronic chr8:28948294(-) A-I      intronic chr8:28940640(-) A-I      intronic chr8:28940538(-) A-I      intronic chr8:28941432(-) A-I      intronic chr8:28947401(-) A-I      intronic chr8:29078598(-) A-I      intronic chr8:29079750(-) A-I      intronic chr8:29079756(-) A-I      intronic chr8:29079781(-) A-I      intronic chr8:29081311(-) A-I      intronic chr8:29084892(-) A-I      intronic chr8:29084899(-) A-I      intronic chr8:29084938(-) A-I      intronic chr8:29085274(-) A-I      intronic chr8:29085442(-) A-I      intronic chr8:29085897(-) A-I      intronic chr8:29090481(-) A-I      intronic chr8:29090590(-) A-I      intronic chr8:29090604(-) A-I      intronic chr8:29090626(-) A-I      intronic chr8:28941486(-) A-I      intronic chr8:29100618(-) A-I      intronic chr8:28941508(-) A-I      intronic chr8:28941547(-) A-I      intronic chr8:29096493(-) A-I      intronic chr8:29100681(-) A-I      intronic chr8:29100732(-) A-I      intronic chr8:29101051(-) A-I      intronic chr8:29101159(-) A-I      intronic chr8:29101659(-) A-I      intronic chr8:29101669(-) A-I      intronic chr8:29101695(-) A-I      intronic chr8:29101705(-) A-I      intronic chr8:29101735(-) A-I      intronic chr8:29114409(-) A-I      intronic chr8:28947399(-) A-I      intronic chr8:28947231(-) A-I      intronic chr8:28947219(-) A-I      intronic chr8:28947200(-) A-I      intronic chr8:29118271(-) A-I      intronic chr8:29100619(-) A-I      intronic chr8:28941662(-) A-I      intronic chr8:28946784(-) A-I      intronic chr8:29115158(-) A-I      intronic chr8:28947199(-) A-I      intronic chr8:29114445(-) A-I      intronic chr8:28940584(-) A-I      intronic chr8:29114410(-) A-I      intronic chr8:28947193(-) A-I      intronic chr8:28946918(-) A-I      intronic chr8:28937736(-) A-I      intronic chr8:28937778(-) A-I      intronic chr8:28940149(-) A-I      intronic chr8:28940150(-) A-I      intronic chr8:28940407(-) A-I      intronic chr8:28940489(-) A-I      intronic chr8:28940498(-) A-I      intronic chr8:28940644(-) A-I      intronic chr8:28963983(-) A-I      intronic chr8:28937746(-) A-I      intronic chr8:29073133(-) A-I      intronic chr8:29085324(-) A-I      intronic chr8:29014861(-) A-I      intronic chr8:29090525(-) A-I      intronic chr8:28963273(-) A-I      intronic chr8:29100864(-) A-I      intronic chr8:29079854(-) A-I      intronic chr8:29100991(-) A-I      intronic chr8:29011796(-) A-I      intronic chr8:29101819(-) A-I      intronic chr8:29085862(-) A-I      intronic chr8:28941605(-) A-I      intronic chr8:28953676(-) A-I      intronic chr8:28940491(-) A-I      intronic chr8:28948481(-) A-I      intronic chr8:29042477(-) A-I      intronic chr8:28953566(-) A-I      intronic chr8:29000228(-) A-I      intronic chr8:29115175(-) A-I      intronic chr8:29013655(-) A-I      intronic chr8:28940490(-) A-I      intronic chr8:28948323(-) A-I      intronic chr8:29029872(-) A-I      intronic chr8:28954074(-) A-I      intronic chr8:29085793(-) A-I      intronic chr8:29030888(-) A-I      intronic chr8:29080652(-) A-I      intronic chr8:28955954(-) A-I      intronic chr8:29078577(-) A-I      intronic chr8:28941596(-) A-I      intronic chr8:28941630(-) A-I      intronic chr8:29042551(-) A-I      intronic chr8:28941569(-) A-I      intronic chr8:29015047(-) A-I      intronic chr8:28963281(-) A-I      intronic chr8:29030601(-) A-I      intronic chr8:29031026(-) A-I      intronic chr8:29101797(-) A-I      intronic chr8:28962687(-) A-I      intronic chr8:28962622(-) A-I      intronic chr8:28953913(-) A-I      intronic chr8:29014317(-) A-I      intronic chr8:28937641(-) A-I      intronic chr8:29040806(-) A-I      intronic chr8:29036885(-) A-I      intronic chr8:28955863(-) A-I      intronic chr8:28956079(-) A-I      intronic chr8:28946923(-) A-I      intronic chr8:28964001(-) A-I      intronic chr8:29079972(-) A-I      intronic chr8:29100971(-) A-I      intronic chr8:28948408(-) A-I      intronic chr8:28947342(-) A-I      intronic chr8:28937731(-) A-I      intronic chr8:28955940(-) A-I      intronic chr8:28963313(-) A-I      intronic chr8:28964865(-) A-I      intronic chr8:29059973(-) A-I      intronic chr8:29014799(-) A-I      intronic chr8:28953954(-) A-I      intronic chr8:29072932(-) A-I      intronic chr8:29030707(-) A-I      intronic chr8:28937624(-) A-I      intronic chr8:28946776(-) A-I      intronic chr8:29079810(-) A-I      intronic chr8:28953893(-) A-I      intronic chr8:29015178(-) A-I      intronic chr8:29100755(-) A-I      intronic chr8:29101002(-) A-I      intronic chr8:29084971(-) A-I      intronic chr8:29085373(-) A-I      intronic chr8:28948458(-) A-I      intronic chr8:29100752(-) A-I      intronic chr8:29090417(-) A-I      intronic chr8:29101811(-) A-I      intronic chr8:28953919(-) A-I      intronic chr8:29000269(-) A-I      intronic chr8:29097276(-) A-I      intronic chr8:29085809(-) A-I      intronic chr8:28965233(-) A-I      intronic chr8:29085437(-) A-I      intronic chr8:28953201(-) A-I      intronic chr8:29013653(-) A-I      intronic chr8:29079619(-) A-I      intronic chr8:28973934(-) A-I      intronic chr8:28965143(-) A-I      intronic chr8:29043701(-) A-I      intronic chr8:29101802(-) A-I      intronic chr8:28963992(-) A-I      intronic chr8:28947328(-) A-I      intronic chr8:29079634(-) A-I      intronic chr8:29029429(-) A-I      intronic chr8:28993209(-) A-I      intronic chr8:29097317(-) A-I      intronic chr8:29101803(-) A-I      intronic chr8:28941623(-) A-I      intronic chr8:28941528(-) A-I      intronic chr8:29030596(-) A-I      intronic chr8:28940524(-) A-I      intronic chr8:29019058(-) A-I      intronic chr8:29097256(-) A-I      intronic chr8:28946904(-) A-I      intronic chr8:29111334(-) A-I      intronic chr8:28953637(-) A-I      intronic chr8:29030882(-) A-I      intronic chr8:29014185(-) A-I      intronic chr8:28953027(-) A-I      intronic chr8:28946831(-) A-I      intronic chr8:28964873(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	KIF13B	chr8:28937706(-) A-G intron -    22484847 chr8:28941596(-) A-G intron -    22484847 chr8:28941623(-) A-G intron -    22484847 chr8:28946831(-) A-G intron -    22484847 chr8:28947328(-) A-G intron -    22484847 chr8:28947329(-) A-G intron -    22484847 chr8:28947342(-) A-G intron -    22484847 chr8:28948323(-) A-G intron -    22484847 chr8:28948408(-) A-G intron -    22484847 chr8:28948458(-) A-G intron -    22484847 chr8:28948514(-) A-G intron -    22484847 chr8:28953201(-) A-G intron -    22484847 chr8:28958053(-) A-G intron -    22484847 chr8:28964873(-) A-G intron -    22484847 chr8:28964890(-) A-G intron -    22484847 chr8:29000228(-) A-G intron -    22484847 chr8:29000232(-) A-G intron -    22484847 chr8:29000269(-) A-G intron -    22484847 chr8:29000570(-) A-G intron -    22484847 chr8:29015047(-) A-G intron -    22484847 chr8:29015178(-) A-G intron -    22484847 chr8:29030596(-) A-G intron -    22484847 chr8:29030704(-) A-G intron -    22484847 chr8:29030707(-) A-G intron -    22484847 chr8:29031026(-) A-G intron -    22484847 chr8:29043673(-) A-G intron -    22484847 chr8:29055849(-) A-C intron -    22484847 chr8:29062711(-) T-C intron -    22484847 chr8:29077039(-) A-G intron -    22484847 chr8:29078716(-) A-G intron -    22484847 chr8:29079634(-) A-G intron -    22484847 chr8:29079854(-) A-G intron -    22484847 chr8:29084918(-) A-G intron -    22484847 chr8:29084971(-) A-G intron -    22484847 chr8:29085437(-) A-G intron -    22484847 chr8:29085862(-) A-G intron -    22484847 chr8:29096549(-) A-G intron -    22484847 chr8:29097185(-) G-A intron -    22484847 chr8:29097276(-) A-G intron -    22484847 chr8:29097317(-) A-G intron -    22484847 chr8:29097318(-) A-G intron -    22484847 chr8:29100752(-) A-G intron -    22484847 chr8:29100755(-) A-G intron -    22484847 chr8:29100971(-) A-G intron -    22484847 chr8:29100991(-) A-G intron -    22484847 chr8:29101616(-) A-G intron -    22484847 chr8:29101803(-) A-G intron -    22484847 chr8:29101819(-) A-G intron -    22484847 chr8:29115175(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	KIF13B	chr8:28924810-28924811(-) m6A 3'UTR       27773535 chr8:28924815-28924816(-) m6A 3'UTR       27773535 chr8:28924877-28924878(-) m6A 3'UTR       27773535 chr8:28924882-28924883(-) m6A 3'UTR       27773535 chr8:28924909-28924910(-) m6A 3'UTR       27773535 chr8:28924928-28924929(-) m6A 3'UTR       24981863//27773535 chr8:28925448-28925449(-) m6A 3'UTR       24284625 chr8:28925511-28925512(-) m6A 3'UTR       - chr8:28925762-28925763(-) m6A 3'UTR       24284625 chr8:28927640-28927641(-) m6A 3'UTR       27773535 chr8:28927750-28927751(-) m6A 3'UTR       25456834//24981863//27773535 chr8:28927756-28927757(-) m6A 3'UTR       25456834//24981863//27773535 chr8:28928001-28928002(-) m6A 3'UTR       24284625//25456834//24981863//27371828//27773536 chr8:28928042-28928043(-) m6A CDS       24284625//25456834//24981863//27371828//27773536 chr8:28928051-28928052(-) m6A CDS       24284625//25456834//24981863//27371828//27773536 chr8:28928161-28928162(-) m6A CDS       24284625//25456834//24981863//27371828//27773536 chr8:28929302-28929303(-) m6A CDS       27773536 chr8:28929357-28929358(-) m6A CDS       27371828//27773536 chr8:28929761-28929762(-) m6A CDS       24284625 chr8:28932822-28932823(-) m6A CDS//intron       24284625 chr8:28956724-28956725(-) m6A CDS       24981863//27773535 chr8:29004017-29004018(-) m6A 3'UTR//CDS       27773535 chr8:29004925-29004926(-) m6A 3'UTR//CDS       27773535 chr8:29004968-29004969(-) m6A 3'UTR//CDS       27773535 chr8:29004983-29004984(-) m6A 3'UTR//CDS       27773535 chr8:29006179-29006180(-) m6A 3'UTR//CDS       24981863 chr8:29024916-29024917(-) m6A 3'UTR//CDS       27773535 chr8:29024962-29024963(-) m6A 3'UTR//CDS       27773535 chr8:29024983-29024984(-) m6A 3'UTR//CDS       27773535 chr8:29025029-29025030(-) m6A 3'UTR//CDS       27773535 chr8:29025077-29025078(-) m6A 3'UTR//CDS       27773535 chr8:29102913-29102914(-) m6A 3'UTR//CDS//exon       27773535 chr8:29102953-29102954(-) m6A CDS//exon       27773535 chr8:29107526-29107527(-) m6A CDS//intron       24981863//27773535 chr8:29107536-29107537(-) m6A CDS//intron       24981863//27773535 chr8:29120504-29120505(-) m6A CDS//exon       24981863//27371828 chr8:29120543-29120544(-) m6A CDS//exon       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	KIF13B	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Membrane HCC cell line (HepG2)|K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H6-3p
Interactor2: KIF13B

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg