Basic Information:

  VIRBase ID:  

VHID00097182

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H6-3p:  MIMAT0008404          SOX11:  NM_003108     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H6-3p	SOX11
miRBase Accession/Entrez ID	MIMAT0008404	6664
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CSS9//MRD27

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SOX11	chr2:5832811-5832812(+) m6A 5'UTR       25456834//24981863 chr2:5832911-5832912(+) m6A CDS       25456834//24981863 chr2:5832971-5832972(+) m6A CDS       25456834//24981863 chr2:5833070-5833071(+) m6A CDS       25456834//24981863 chr2:5833127-5833128(+) m6A CDS       25456834//24981863 chr2:5833232-5833233(+) m6A CDS       25456834//24981863 chr2:5833327-5833328(+) m6A CDS       25456834//24981863 chr2:5833421-5833422(+) m6A CDS       25456834//24981863 chr2:5833572-5833573(+) m6A CDS       25456834//24981863 chr2:5833599-5833600(+) m6A CDS       25456834//24981863 chr2:5833802-5833803(+) m6A CDS       - chr2:5834018-5834019(+) m6A CDS       25456834//24981863 chr2:5834135-5834136(+) m6A CDS       25456834//24981863 chr2:5834150-5834151(+) m6A CDS       25456834//24981863 chr2:5834372-5834373(+) m6A 3'UTR       24981863 chr2:5834670-5834671(+) m6A 3'UTR       24981863 chr2:5834734-5834735(+) m6A 3'UTR       24981863 chr2:5834743-5834744(+) m6A 3'UTR       24981863 chr2:5834773-5834774(+) m6A 3'UTR       24981863 chr2:5834841-5834842(+) m6A 3'UTR       24981863 chr2:5834875-5834876(+) m6A 3'UTR       24981863 chr2:5834901-5834902(+) m6A 3'UTR       24981863 chr2:5834928-5834929(+) m6A 3'UTR       24981863 chr2:5834935-5834936(+) m6A 3'UTR       24981863 chr2:5836519-5836520(+) m6A 3'UTR       25456834 chr2:5836592-5836593(+) m6A 3'UTR       25456834 chr2:5836651-5836652(+) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SOX11	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H6-3p
Interactor2: SOX11

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg