Detail Information

Basic Information:


  VIRBase ID:  

VHID00096345

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H6-3p:           ARL3:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H6-3p ARL3
miRBase
Accession/Entrez ID		 MIMAT0008404 403
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - ARFL3//JBTS35//RP83

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ARL3
chr10:104467768(-) A-I      intronic
chr10:104463007(-) A-I      intronic
chr10:104462962(-) A-I      intronic
chr10:104457163(-) A-I      intronic
chr10:104457159(-) A-I      intronic
chr10:104457154(-) A-I      intronic
chr10:104457140(-) A-I      intronic
chr10:104467733(-) A-I      intronic
chr10:104457139(-) A-I      intronic
chr10:104457100(-) A-I      intronic
chr10:104444770(-) A-I      intronic
chr10:104457111(-) A-I      intronic
chr10:104457115(-) A-I      intronic
chr10:104444761(-) A-I      intronic
chr10:104444742(-) A-I      intronic
chr10:104457112(-) A-I      intronic
chr10:104444760(-) A-I      intronic
chr10:104457131(-) A-I      intronic
chr10:104469317(-) A-I      intronic
chr10:104444552(-) A-I      intronic
chr10:104466632(-) A-I      intronic
chr10:104467047(-) A-I      intronic
chr10:104448974(-) A-I      intronic
chr10:104466019(-) A-I      intronic
chr10:104469352(-) A-I      intronic
chr10:104466972(-) A-I      intronic
chr10:104444507(-) A-I      intronic
chr10:104462957(-) A-I      intronic
chr10:104468451(-) A-I      intronic
chr10:104468895(-) A-I      intronic
chr10:104448982(-) A-I      intronic
chr10:104469787(-) A-I      intronic
chr10:104444501(-) A-I      intronic
chr10:104448835(-) A-I      intronic
chr10:104463379(-) A-I      intronic
chr10:104448999(-) A-I      intronic
chr10:104444603(-) A-I      intronic
chr10:104466027(-) A-I      intronic
chr10:104444897(-) A-I      intronic
chr10:104463403(-) A-I      intronic
chr10:104449025(-) A-I      intronic
chr10:104469610(-) A-I      intronic
chr10:104463467(-) A-I      intronic
chr10:104449499(-) A-I      intronic
chr10:104461832(-) A-I      intronic
chr10:104444862(-) A-I      intronic
chr10:104467890(-) A-I      intronic
chr10:104466035(-) A-I      intronic
chr10:104463473(-) A-I      intronic
chr10:104447333(-) A-I      intronic
chr10:104448973(-) A-I      intronic
chr10:104449546(-) A-I      intronic
chr10:104466200(-) A-I      intronic
chr10:104468396(-) A-I      intronic
chr10:104466514(-) A-I      intronic
chr10:104466050(-) A-I      intronic
chr10:104467846(-) A-I      intronic
chr10:104460402(-) A-I      intronic
chr10:104468759(-) A-I      intronic
chr10:104466968(-) A-I      intronic
chr10:104460426(-) A-I      intronic
chr10:104463003(-) A-I      intronic
chr10:104444884(-) A-I      intronic
chr10:104463080(-) A-I      intronic
chr10:104448900(-) A-I      intronic
chr10:104466133(-) A-I      intronic
chr10:104454492(-) A-I      intronic
chr10:104439739(-) A-I      intronic
chr10:104444429(-) A-I      intronic
chr10:104444650(-) A-I      intronic
chr10:104463082(-) A-I      intronic
chr10:104444524(-) A-I      intronic
chr10:104464340(-) A-I      intronic
chr10:104444894(-) A-I      intronic
chr10:104466126(-) A-I      intronic
chr10:104454503(-) A-I      intronic
chr10:104464350(-) A-I      intronic
chr10:104463352(-) A-I      intronic
chr10:104467835(-) A-I      intronic
chr10:104463372(-) A-I      intronic
chr10:104467008(-) A-I      intronic
chr10:104444672(-) A-I      intronic
chr10:104466807(-) A-I      intronic
chr10:104463378(-) A-I      intronic
chr10:104468448(-) A-I      intronic
chr10:104444924(-) A-I      intronic
chr10:104444667(-) A-I      intronic
chr10:104466084(-) A-I      intronic
chr10:104467700(-) A-I      intronic
chr10:104463475(-) A-I      intronic
chr10:104444012(-) A-I      intronic
chr10:104468936(-) A-I      intronic
chr10:104448897(-) A-I      intronic
chr10:104444178(-) A-I      intronic
chr10:104463874(-) A-I      intronic
chr10:104469304(-) A-I      intronic
chr10:104469709(-) A-I      intronic
chr10:104468905(-) A-I      intronic
chr10:104468698(-) A-I      intronic
chr10:104468527(-) A-I      intronic
chr10:104467799(-) A-I      intronic
chr10:104466525(-) A-I      intronic
chr10:104466693(-) A-I      intronic
chr10:104467003(-) A-I      intronic
chr10:104468369(-) A-I      intronic
chr10:104455859(-) A-I      intronic
chr10:104449432(-) A-I      intronic
chr10:104469531(-) A-I      intronic
chr10:104467011(-) A-I      intronic
chr10:104466979(-) A-I      intronic
chr10:104469679(-) A-I      intronic
chr10:104444906(-) A-I      intronic
chr10:104469205(-) A-I      intronic
chr10:104444836(-) A-I      intronic
chr10:104466933(-) A-I      intronic
chr10:104462936(-) A-I      intronic
chr10:104460472(-) A-I      intronic
chr10:104460471(-) A-I      intronic
chr10:104444866(-) A-I      intronic
chr10:104469708(-) A-I      intronic
chr10:104469140(-) A-I      intronic
chr10:104469778(-) A-I      intronic
chr10:104466943(-) A-I      intronic
chr10:104469292(-) A-I      intronic
chr10:104466886(-) A-I      intronic
chr10:104467848(-) A-I      intronic
chr10:104466537(-) A-I      intronic
chr10:104444787(-) A-I      intronic
chr10:104448459(-) A-I      intronic
chr10:104467865(-) A-I      intronic
chr10:104444463(-) A-I      intronic
chr10:104467725(-) A-I      intronic
chr10:104469545(-) A-I      intronic
chr10:104466895(-) A-I      intronic
chr10:104466109(-) A-I      intronic
chr10:104463016(-) A-I      intronic
chr10:104466623(-) A-I      intronic
chr10:104460084(-) A-I      intronic
chr10:104449332(-) A-I      intronic
chr10:104466526(-) A-I      intronic
chr10:104449498(-) A-I      intronic
chr10:104439829(-) A-I      intronic
chr10:104468733(-) A-I      intronic
chr10:104459981(-) A-I      intronic
chr10:104443978(-) A-I      intronic
chr10:104463023(-) A-I      intronic
chr10:104466521(-) A-I      intronic
chr10:104444493(-) A-I      intronic
chr10:104444528(-) A-I      intronic
chr10:104466872(-) A-I      intronic
chr10:104466880(-) A-I      intronic
chr10:104446346(-) A-I      intronic
chr10:104468388(-) A-I      intronic
chr10:104468826(-) A-I      intronic
chr10:104466557(-) A-I      intronic
chr10:104468550(-) A-I      intronic
chr10:104444673(-) A-I      intronic
chr10:104468431(-) A-I      intronic
chr10:104448359(-) A-I      intronic
chr10:104467786(-) A-I      intronic
chr10:104468862(-) A-I      intronic
chr10:104464228(-) A-I      intronic
chr10:104444560(-) A-I      intronic
chr10:104467809(-) A-I      intronic
chr10:104459954(-) A-I      intronic
chr10:104466146(-) A-I      intronic
chr10:104467763(-) A-I      intronic
chr10:104468530(-) A-I      intronic
chr10:104444695(-) A-I      intronic
chr10:104444534(-) A-I      intronic
chr10:104439865(-) A-I      intronic
chr10:104468896(-) A-I      intronic
chr10:104468810(-) A-I      intronic
chr10:104466127(-) A-I      intronic
chr10:104466701(-) A-I      intronic
chr10:104444492(-) A-I      intronic
chr10:104444464(-) A-I      intronic
chr10:104468439(-) A-I      intronic
chr10:104446373(-) A-I      intronic
chr10:104466488(-) A-I      intronic
chr10:104469321(-) A-I      intronic
chr10:104463656(-) A-I      intronic
chr10:104469199(-) A-I      intronic
chr10:104468764(-) A-I      intronic
chr10:104439839(-) A-I      intronic
chr10:104468800(-) A-I      intronic
chr10:104449554(-) A-I      intronic
chr10:104466808(-) A-I      intronic
chr10:104444848(-) A-I      intronic
chr10:104463472(-) A-I      intronic
chr10:104444577(-) A-I      intronic
chr10:104468489(-) A-I      intronic
chr10:104467867(-) A-I      intronic
chr10:104469627(-) A-I      intronic
chr10:104468744(-) A-I      intronic
chr10:104444858(-) A-I      intronic
chr10:104469691(-) A-I      intronic
chr10:104448385(-) A-I      intronic
chr10:104466566(-) A-I      intronic
chr10:104444930(-) A-I      intronic
chr10:104467713(-) A-I      intronic
chr10:104467753(-) A-I      intronic
chr10:104444748(-) A-I      intronic
chr10:104469682(-) A-I      intronic
chr10:104468802(-) A-I      intronic
chr10:104443981(-) A-I      intronic
chr10:104466052(-) A-I      intronic
chr10:104466567(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ARL3
chr10:104443978(-) A-G intron -    22484847
chr10:104444464(-) A-G intron -    22484847
chr10:104466557(-) A-G intron -    22484847
chr10:104467713(-) A-G intron -    22484847
chr10:104467753(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ARL3
chr10:104436687-104436688(-) m6A CDS       24981863//27371828//22608085
chr10:104445642-104445643(-) m6A CDS       24981863//27773535//27371828//22608085
chr10:104445647-104445648(-) m6A CDS       24981863//27773535//27371828//22608085
chr10:104445728-104445729(-) m6A CDS       24981863//27773535
chr10:104445755-104445756(-) m6A CDS       24981863//27773535
chr10:104449677-104449678(-) m6A CDS       24981863//27773535
chr10:104459168-104459169(-) m6A CDS       27773535
chr10:104459183-104459184(-) m6A CDS       27773535
chr10:104459193-104459194(-) m6A CDS       27773535
chr10:104459207-104459208(-) m6A CDS       27773535
chr10:104465127-104465128(-) m6A CDS       24981863//27773535//27371828
chr10:104465158-104465159(-) m6A CDS       24981863//27773535//27371828
chr10:104465205-104465206(-) m6A CDS       25456834//24981863//27773535//27371828
chr10:104474044-104474045(-) m6A 5'UTR       24209618//25456834//24981863//27371828//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ARL3
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H6-3p
Interactor2: ARL3

Evidence Support:


Prediction-Evidence cRep//miRanda
Support Database RepTar//VmiReg

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