Basic Information:

  VIRBase ID:  

VHID00096166

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H5-3p:  MIMAT0008403          ZNF772:  NM_001024596     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H5-3p	ZNF772
miRBase Accession/Entrez ID	MIMAT0008403	400720
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNF772	chr19:57978149-57978150(-) m6A 3'UTR       27773535 chr19:57978185-57978186(-) m6A 3'UTR       27773535 chr19:57978211-57978212(-) m6A 3'UTR       27773535 chr19:57978222-57978223(-) m6A 3'UTR       27773535 chr19:57978280-57978281(-) m6A 3'UTR       27773535 chr19:57982891-57982892(-) m6A 3'UTR//intron       24981863//22608085 chr19:57982935-57982936(-) m6A 3'UTR//intron       24981863//22608085 chr19:57983541-57983542(-) m6A 3'UTR//intron       27773535 chr19:57983981-57983982(-) m6A 3'UTR//intron       24981863 chr19:57984014-57984015(-) m6A 3'UTR//intron       24209618//24981863//27773535//22608085 chr19:57984063-57984064(-) m6A 3'UTR//intron       24209618//27773535//22608085 chr19:57984125-57984126(-) m6A 3'UTR//intron       24209618//24981863//27773535//22608085 chr19:57984349-57984350(-) m6A 3'UTR//intron       24284625//25456834//24981863//27773535//22608085 chr19:57984453-57984454(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr19:57984527-57984528(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr19:57984542-57984543(-) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//27371828//22608085 chr19:57984773-57984774(-) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//22608085 chr19:57984926-57984927(-) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//22608085 chr19:57984935-57984936(-) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//22608085 chr19:57985193-57985194(-) m6A 3'UTR//CDS//intron       24209618//27773535 chr19:57985207-57985208(-) m6A 3'UTR//CDS//intron       24209618//27773535 chr19:57985275-57985276(-) m6A 3'UTR//CDS//intron       24209618//24981863//27773535//22608085 chr19:57985291-57985292(-) m6A 3'UTR//CDS//intron       24209618//25456834//24981863//27773535//27371828//22608085 chr19:57985422-57985423(-) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr19:57985479-57985480(-) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr19:57985517-57985518(-) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr19:57985554-57985555(-) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr19:57985574-57985575(-) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr19:57985601-57985602(-) m6A 3'UTR//CDS//intron       24284625//25456834//24981863//27773535//27371828//22608085 chr19:57985618-57985619(-) m6A 3'UTR//CDS//intron       24284625//24981863//27773535//27371828//22608085 chr19:57985647-57985648(-) m6A 3'UTR//CDS//intron       24284625//24981863//27773535//22608085 chr19:57985669-57985670(-) m6A 3'UTR//CDS//intron       24284625//27773535//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZNF772	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H5-3p
Interactor2: ZNF772

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg