Detail Information

Basic Information:


  VIRBase ID:  

VHID00096063

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H5-3p:           NCKAP5:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H5-3p NCKAP5
miRBase
Accession/Entrez ID		 MIMAT0008403 344148
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - ERIH1//ERIH2//NAP5

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR NCKAP5
chr2:134239894(-) A-I      intronic
chr2:133480931(-) A-I      intronic
chr2:134102246(-) A-I      intronic
chr2:134102242(-) A-I      intronic
chr2:133480875(-) A-I      intronic
chr2:133480930(-) A-I      intronic
chr2:134239881(-) A-I      intronic
chr2:134239927(-) A-I      intronic
chr2:134239909(-) A-I      intronic
chr2:134239900(-) A-I      intronic
chr2:133480932(-) A-I      intronic
chr2:134239880(-) A-I      intronic
chr2:133480905(-) A-I      intronic
chr2:134105003(-) A-I      intronic
chr2:134105081(-) A-I      intronic
chr2:134116041(-) A-I      intronic
chr2:134116143(-) A-I      intronic
chr2:133456218(-) A-I      intronic
chr2:133480580(-) A-I      intronic
chr2:133522960(-) A-I      intronic
chr2:133523120(-) A-I      intronic
chr2:133523121(-) A-I      intronic
chr2:133523128(-) A-I      intronic
chr2:133523690(-) A-I      intronic
chr2:133525020(-) A-I      intronic
chr2:133550759(-) A-I      intronic
chr2:133550862(-) A-I      intronic
chr2:133550761(-) A-I      intronic
chr2:133552122(-) A-I      intronic
chr2:133552123(-) A-I      intronic
chr2:133552173(-) A-I      intronic
chr2:134105094(-) A-I      intronic
chr2:133575738(-) A-I      intronic
chr2:133576199(-) A-I      intronic
chr2:133620171(-) A-I      intronic
chr2:133597244(-) A-I      intronic
chr2:133597925(-) A-I      intronic
chr2:133598038(-) A-I      intronic
chr2:133968901(-) A-I      intronic
chr2:133968913(-) A-I      intronic
chr2:133886420(-) A-I      intronic
chr2:133886421(-) A-I      intronic
chr2:133886443(-) A-I      intronic
chr2:133936572(-) A-I      intronic
chr2:133936624(-) A-I      intronic
chr2:133869858(-) A-I      intronic
chr2:133859926(-) A-I      intronic
chr2:133859925(-) A-I      intronic
chr2:133804128(-) A-I      intronic
chr2:133804119(-) A-I      intronic
chr2:133936628(-) A-I      intronic
chr2:133968863(-) A-I      intronic
chr2:133693758(-) A-I      intronic
chr2:133692076(-) A-I      intronic
chr2:133692059(-) A-I      intronic
chr2:133692034(-) A-I      intronic
chr2:133691954(-) A-I      intronic
chr2:134047201(-) A-I      intronic
chr2:133598051(-) A-I      intronic
chr2:134082400(-) A-I      intronic
chr2:134082401(-) A-I      intronic
chr2:134082402(-) A-I      intronic
chr2:134083854(-) A-I      intronic
chr2:133552202(-) A-I      intronic
chr2:134083926(-) A-I      intronic
chr2:133968865(-) A-I      intronic
chr2:134083939(-) A-I      intronic
chr2:134088382(-) A-I      intronic
chr2:134088433(-) A-I      intronic
chr2:134099649(-) A-I      intronic
chr2:134099675(-) A-I      intronic
chr2:134099688(-) A-I      intronic
chr2:134099689(-) A-I      intronic
chr2:134101833(-) A-I      intronic
chr2:134101928(-) A-I      intronic
chr2:134101966(-) A-I      intronic
chr2:134104963(-) A-I      intronic
chr2:134105001(-) A-I      intronic
chr2:134105002(-) A-I      intronic
chr2:133620172(-) A-I      intronic
chr2:133965828(-) A-I      intronic
chr2:133446387(-) A-I      intronic
chr2:133480467(-) A-I      intronic
chr2:133480627(-) A-I      intronic
chr2:133829743(-) A-I      intronic
chr2:134088436(-) A-I      intronic
chr2:133620173(-) A-I      intronic
chr2:133550853(-) A-I      intronic
chr2:133470211(-) A-I      intronic
chr2:133454643(-) A-I      intronic
chr2:133886352(-) A-I      intronic
chr2:133523114(-) A-I      intronic
chr2:133456151(-) A-I      intronic
chr2:133449853(-) A-I      intronic
chr2:134087741(-) A-I      intronic
chr2:134048565(-) A-I      intronic
chr2:133597986(-) A-I      intronic
chr2:133460710(-) A-I      intronic
chr2:134088351(-) A-I      intronic
chr2:133550854(-) A-I      intronic
chr2:133692063(-) A-I      intronic
chr2:134082539(-) A-I      intronic
chr2:133704213(-) A-I      intronic
chr2:133523016(-) A-I      intronic
chr2:134111944(-) A-I      intronic
chr2:133693749(-) A-I      intronic
chr2:133970212(-) A-I      intronic
chr2:133472323(-) A-I      intronic
chr2:133576249(-) A-I      intronic
chr2:134088289(-) A-I      intronic
chr2:134107985(-) A-I      intronic
chr2:133970078(-) A-I      intronic
chr2:134087929(-) A-I      intronic
chr2:133522961(-) A-I      intronic
chr2:133470219(-) A-I      intronic
chr2:134104881(-) A-I      intronic
chr2:133704219(-) A-I      intronic
chr2:133524940(-) A-I      intronic
chr2:133993475(-) A-I      intronic
chr2:133550698(-) A-I      intronic
chr2:134087736(-) A-I      intronic
chr2:133939316(-) A-I      intronic
chr2:133460713(-) A-I      intronic
chr2:133446437(-) A-I      intronic
chr2:133449854(-) A-I      intronic
chr2:133832207(-) A-I      intronic
chr2:133525112(-) A-I      intronic
chr2:134277537(-) A-I      intronic
chr2:133597248(-) A-I      intronic
chr2:133693828(-) A-I      intronic
chr2:133759056(-) A-I      intronic
chr2:134047166(-) A-I      intronic
chr2:133575618(-) A-I      intronic
chr2:133552023(-) A-I      intronic
chr2:133640689(-) A-I      intronic
chr2:134116037(-) A-I      intronic
chr2:133552087(-) A-I      intronic
chr2:133859884(-) A-I      intronic
chr2:134087801(-) A-I      intronic
chr2:133523081(-) A-I      intronic
chr2:133597946(-) A-I      intronic
chr2:133759055(-) A-I      intronic
chr2:133640548(-) A-I      intronic
chr2:134088383(-) A-I      intronic
chr2:133646071(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED NCKAP5
chr2:134088438(-) A-I intron -    22327324
chr2:133523767(-) A-G intron -    22484847
chr2:133552040(-) A-G intron -    22484847
chr2:133552087(-) A-G intron -    22484847
chr2:133576249(-) A-G intron -    22484847
chr2:133597236(-) A-G intron -    22484847
chr2:133692064(-) A-G intron -    22484847
chr2:133829743(-) A-G intron -    22484847
chr2:133832207(-) A-G intron -    22484847
chr2:133970078(-) A-G intron -    22484847
chr2:133970232(-) T-G intron -    22484847
chr2:134082539(-) A-G intron -    22484847
chr2:134088436(-) A-G intron -    22484847
chr2:134088438(-) A-G intron -    22484847
chr2:134104881(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase NCKAP5
chr2:133430501-133430502(-) m6A 3'UTR       24981863//27773535
chr2:133430567-133430568(-) m6A 3'UTR       24284625//24981863//27773535
chr2:133430592-133430593(-) m6A 3'UTR       24284625//24981863//27773535
chr2:133430672-133430673(-) m6A 3'UTR       24981863//27773535
chr2:133430706-133430707(-) m6A 3'UTR       24981863//27773535
chr2:133430737-133430738(-) m6A 3'UTR       27773535
chr2:133430750-133430751(-) m6A 3'UTR       27773535
chr2:133430759-133430760(-) m6A 3'UTR       27773535
chr2:133430856-133430857(-) m6A 3'UTR       27773535
chr2:133489450-133489451(-) m6A CDS       27773535
chr2:133489524-133489525(-) m6A CDS//exon       27773535
chr2:133489566-133489567(-) m6A CDS//exon       27773535
chr2:133489582-133489583(-) m6A CDS//exon       27773535
chr2:133489596-133489597(-) m6A CDS//exon       27773535
chr2:133538667-133538668(-) m6A CDS//exon//intron       27773535
chr2:133538679-133538680(-) m6A CDS//exon//intron       27773535
chr2:133538776-133538777(-) m6A CDS//exon//intron       27773535
chr2:133539515-133539516(-) m6A CDS//exon//intron       24284625//24981863//27773535
chr2:133539523-133539524(-) m6A CDS//exon//intron       24284625//24981863//27773535
chr2:133539539-133539540(-) m6A CDS//exon//intron       24284625//24981863//27773535
chr2:133539568-133539569(-) m6A CDS//exon//intron       24284625//24981863//27773535
chr2:133539580-133539581(-) m6A CDS//exon//intron       24284625//24981863//27773535
chr2:133539605-133539606(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133539615-133539616(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133539671-133539672(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133539693-133539694(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133539706-133539707(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133539752-133539753(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133539795-133539796(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133539806-133539807(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133539835-133539836(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133540044-133540045(-) m6A CDS//intron       24284625//24981863//27773536
chr2:133540068-133540069(-) m6A CDS//intron       24284625//24981863//27773536
chr2:133540092-133540093(-) m6A CDS//intron       24284625//24981863//27773536
chr2:133540124-133540125(-) m6A CDS//intron       24284625//27773535//27773536
chr2:133540165-133540166(-) m6A CDS//intron       24284625//27773535
chr2:133540223-133540224(-) m6A CDS//intron       24284625//27773535
chr2:133540249-133540250(-) m6A CDS//intron       24284625
chr2:133540532-133540533(-) m6A CDS//intron       24981863//27773535
chr2:133540594-133540595(-) m6A CDS//intron       24981863//27773535
chr2:133540606-133540607(-) m6A CDS//intron       24981863//27773535
chr2:133540704-133540705(-) m6A CDS//intron       24981863//27773535
chr2:133540808-133540809(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133540826-133540827(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133540865-133540866(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133540876-133540877(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133540936-133540937(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133540953-133540954(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133540960-133540961(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133541113-133541114(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133541190-133541191(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133541204-133541205(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133541217-133541218(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133541226-133541227(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133541241-133541242(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133541331-133541332(-) m6A CDS//intron       24284625//27773535
chr2:133541398-133541399(-) m6A CDS//intron       24981863//27773535
chr2:133541484-133541485(-) m6A CDS//intron       24284625//27773535
chr2:133541493-133541494(-) m6A CDS//intron       24284625//27773535
chr2:133541511-133541512(-) m6A CDS//intron       24284625//27773535
chr2:133541641-133541642(-) m6A CDS//intron       24284625//25456834//27773535
chr2:133541709-133541710(-) m6A CDS//intron       24284625//25456834//24981863
chr2:133541735-133541736(-) m6A CDS//intron       24284625//25456834//24981863
chr2:133541782-133541783(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133541835-133541836(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133541854-133541855(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133541938-133541939(-) m6A CDS//intron       24284625//27773535
chr2:133542058-133542059(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133542096-133542097(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133542158-133542159(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133542170-133542171(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133542200-133542201(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133542259-133542260(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133542271-133542272(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133542327-133542328(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133542402-133542403(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133542441-133542442(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133542453-133542454(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133542475-133542476(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133542536-133542537(-) m6A CDS//intron       24981863
chr2:133542826-133542827(-) m6A CDS//intron       24981863
chr2:133542837-133542838(-) m6A CDS//intron       24981863
chr2:133542905-133542906(-) m6A CDS//intron       24981863
chr2:133542984-133542985(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133542994-133542995(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133543023-133543024(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133543091-133543092(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133543135-133543136(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133543213-133543214(-) m6A CDS//intron       24284625//24981863//27773535
chr2:133543277-133543278(-) m6A CDS//intron       24981863
chr2:133547608-133547609(-) m6A CDS       24981863
chr2:133636444-133636445(-) m6A CDS       27773535
chr2:133721327-133721328(-) m6A CDS       24981863//27773535
chr2:133721415-133721416(-) m6A CDS       24981863//27773535
chr2:133751747-133751748(-) m6A CDS       24981863//27773535
chr2:133751801-133751802(-) m6A CDS       27773535
chr2:133879555-133879556(-) m6A 3'UTR//intron       27773535
chr2:133880871-133880872(-) m6A 3'UTR//intron       27773535
chr2:133880887-133880888(-) m6A 3'UTR//intron       27773535
chr2:133881322-133881323(-) m6A 3'UTR//intron       27773535
chr2:133887647-133887648(-) m6A CDS       24981863//27773535
chr2:133887662-133887663(-) m6A CDS       24981863//27773535
chr2:133971304-133971305(-) m6A CDS       24981863//27773535
chr2:134060671-134060672(-) m6A CDS       24284625//27773535
chr2:134275041-134275042(-) m6A CDS       24284625//27773535
chr2:134275065-134275066(-) m6A CDS       27773535
chr2:134275082-134275083(-) m6A CDS       27773535
chr2:134325937-134325938(-) m6A 5'UTR       24981863
chr2:134325967-134325968(-) m6A 5'UTR       24981863
chr2:134325990-134325991(-) m6A 5'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate NCKAP5
Exosome Blood     -
Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H5-3p
Interactor2: NCKAP5

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//Targetscan
Support Database RepTar//VmiReg

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