Basic Information:

  VIRBase ID:  

VHID00096062

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H5-3p:  MIMAT0008403          XKR7:  NM_001011718     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H5-3p	XKR7
miRBase Accession/Entrez ID	MIMAT0008403	343702
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C20orf159//dJ310O13.4

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	XKR7	chr20:30582419(+) A-I      intronic chr20:30577517(+) A-I      intronic chr20:30565978(+) A-I      intronic chr20:30568913(+) A-I      intronic chr20:30582362(+) A-I      intronic chr20:30572053(+) A-I      intronic chr20:30567145(+) A-I      intronic chr20:30577503(+) A-I      intronic chr20:30582260(+) A-I      intronic chr20:30577556(+) A-I      intronic chr20:30578023(+) A-I      intronic chr20:30582444(+) A-I      intronic chr20:30578020(+) A-I      intronic chr20:30564390(+) A-I      intronic chr20:30582311(+) A-I      intronic chr20:30566048(+) A-I      intronic chr20:30565952(+) A-I      intronic chr20:30571975(+) A-I      intronic chr20:30571943(+) A-I      intronic chr20:30582459(+) A-I      intronic chr20:30577516(+) A-I      intronic chr20:30569111(+) A-I      intronic chr20:30564450(+) A-I      intronic chr20:30577651(+) A-I      intronic chr20:30577434(+) A-I      intronic chr20:30577491(+) A-I      intronic chr20:30565970(+) A-I      intronic chr20:30579826(+) A-I      intronic chr20:30578069(+) A-I      intronic chr20:30571944(+) A-I      intronic chr20:30571985(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	XKR7	chr20:30556349-30556350(+) m6A CDS       25456834//24981863 chr20:30556369-30556370(+) m6A CDS       25456834//24981863 chr20:30556405-30556406(+) m6A CDS       25456834//24981863 chr20:30556425-30556426(+) m6A CDS       25456834//24981863 chr20:30584954-30584955(+) m6A CDS       25456834 chr20:30585002-30585003(+) m6A CDS       25456834//24981863 chr20:30585071-30585072(+) m6A CDS       25456834 chr20:30585158-30585159(+) m6A CDS       25456834//24981863 chr20:30585221-30585222(+) m6A CDS       25456834//24981863 chr20:30585248-30585249(+) m6A CDS       25456834 chr20:30585285-30585286(+) m6A 3'UTR       25456834 chr20:30587438-30587439(+) m6A 3'UTR       25456834 chr20:30587444-30587445(+) m6A 3'UTR       25456834 chr20:30587452-30587453(+) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	XKR7	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H5-3p
Interactor2: XKR7

Evidence Support:

Prediction-Evidence	cRep//miRanda//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg