Basic Information:

  VIRBase ID:  

VHID00095992

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H5-3p:  MIMAT0008403          FRYL:  NM_015030     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H5-3p	FRYL
miRBase Accession/Entrez ID	MIMAT0008403	285527
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	AF4p12//KIAA0826//MOR2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	FRYL	chr4:48774205(-) A-I      intronic chr4:48774206(-) A-I      intronic chr4:48774209(-) A-I      intronic chr4:48774261(-) A-I      intronic chr4:48585810(-) A-I      intronic chr4:48774269(-) A-I      intronic chr4:48774275(-) A-I      intronic chr4:48774292(-) A-I      intronic chr4:48672393(-) A-I      intronic chr4:48672253(-) A-I      intronic chr4:48672248(-) A-I      intronic chr4:48672233(-) A-I      intronic chr4:48669892(-) A-I      intronic chr4:48767031(-) A-I      intronic chr4:48767029(-) A-I      intronic chr4:48669775(-) A-I      intronic chr4:48661198(-) A-I      intronic chr4:48661196(-) A-I      intronic chr4:48743511(-) A-I      intronic chr4:48745109(-) A-I      intronic chr4:48743510(-) A-I      intronic chr4:48745115(-) A-I      intronic chr4:48758033(-) A-I      intronic chr4:48661185(-) A-I      intronic chr4:48661170(-) A-I      intronic chr4:48634024(-) A-I      intronic chr4:48634023(-) A-I      intronic chr4:48614665(-) A-I      intronic chr4:48614701(-) A-I      intronic chr4:48614724(-) A-I      intronic chr4:48614734(-) A-I      intronic chr4:48614756(-) A-I      intronic chr4:48614802(-) A-I      intronic chr4:48615738(-) A-I      intronic chr4:48585301(-) A-I      intronic chr4:48585307(-) A-I      intronic chr4:48770927(-) A-I      intronic chr4:48719722(-) A-I      intronic chr4:48585333(-) A-I      intronic chr4:48585340(-) A-I      intronic chr4:48585347(-) A-I      intronic chr4:48585373(-) A-I      intronic chr4:48585756(-) A-I      intronic chr4:48616494(-) A-I      intronic chr4:48616976(-) A-I      intronic chr4:48616982(-) A-I      intronic chr4:48617008(-) A-I      intronic chr4:48617038(-) A-I      intronic chr4:48774177(-) A-I      intronic chr4:48774192(-) A-I      intronic chr4:48774197(-) A-I      intronic chr4:48774198(-) A-I      intronic chr4:48774208(-) A-I      intronic chr4:48767026(-) A-I      intronic chr4:48661150(-) A-I      intronic chr4:48661147(-) A-I      intronic chr4:48661123(-) A-I      intronic chr4:48774219(-) A-I      intronic chr4:48774229(-) A-I      intronic chr4:48774287(-) A-I      intronic chr4:48774289(-) A-I      intronic chr4:48774293(-) A-I      intronic chr4:48775141(-) A-I      intronic chr4:48775143(-) A-I      intronic chr4:48775177(-) A-I      intronic chr4:48774171(-) A-I      intronic chr4:48774191(-) A-I      intronic chr4:48758078(-) A-I      intronic chr4:48758085(-) A-I      intronic chr4:48758799(-) A-I      intronic chr4:48758927(-) A-I      intronic chr4:48766020(-) A-I      intronic chr4:48766982(-) A-I      intronic chr4:48767063(-) A-I      intronic chr4:48767065(-) A-I      intronic chr4:48770648(-) A-I      intronic chr4:48770725(-) A-I      intronic chr4:48770798(-) A-I      intronic chr4:48775771(-) A-I      intronic chr4:48775815(-) A-I      intronic chr4:48775816(-) A-I      intronic chr4:48775862(-) A-I      intronic chr4:48776645(-) A-I      intronic chr4:48743445(-) A-I      intronic chr4:48743438(-) A-I      intronic chr4:48741374(-) A-I      intronic chr4:48741372(-) A-I      intronic chr4:48741336(-) A-I      intronic chr4:48741280(-) A-I      intronic chr4:48741235(-) A-I      intronic chr4:48741201(-) A-I      intronic chr4:48740802(-) A-I      intronic chr4:48740779(-) A-I      intronic chr4:48774196(-) A-I      intronic chr4:48740775(-) A-I      intronic chr4:48739192(-) A-I      intronic chr4:48739191(-) A-I      intronic chr4:48739062(-) A-I      intronic chr4:48739040(-) A-I      intronic chr4:48739039(-) A-I      intronic chr4:48735173(-) A-I      intronic chr4:48726119(-) A-I      intronic chr4:48725342(-) A-I      intronic chr4:48725339(-) A-I      intronic chr4:48725336(-) A-I      intronic chr4:48725298(-) A-I      intronic chr4:48723796(-) A-I      intronic chr4:48723782(-) A-I      intronic chr4:48719846(-) A-I      intronic chr4:48719760(-) A-I      intronic chr4:48719758(-) A-I      intronic chr4:48719600(-) A-I      intronic chr4:48710702(-) A-I      intronic chr4:48710701(-) A-I      intronic chr4:48710360(-) A-I      intronic chr4:48710249(-) A-I      intronic chr4:48709934(-) A-I      intronic chr4:48708145(-) A-I      intronic chr4:48585835(-) A-I      intronic chr4:48614648(-) A-I      intronic chr4:48614663(-) A-I      intronic chr4:48614728(-) A-I      intronic chr4:48776669(-) A-I      intronic chr4:48708122(-) A-I      intronic chr4:48706618(-) A-I      intronic chr4:48702724(-) A-I      intronic chr4:48697077(-) A-I      intronic chr4:48696921(-) A-I      intronic chr4:48696400(-) A-I      intronic chr4:48694661(-) A-I      intronic chr4:48680444(-) A-I      intronic chr4:48680413(-) A-I      intronic chr4:48680165(-) A-I      intronic chr4:48585258(-) A-I      intronic chr4:48572126(-) A-I      intronic chr4:48572120(-) A-I      intronic chr4:48572087(-) A-I      intronic chr4:48570187(-) A-I      intronic chr4:48679655(-) A-I      intronic chr4:48679652(-) A-I      intronic chr4:48679624(-) A-I      intronic chr4:48679599(-) A-I      intronic chr4:48679595(-) A-I      intronic chr4:48679576(-) A-I      intronic chr4:48677161(-) A-I      intronic chr4:48767075(-) A-I      intronic chr4:48767066(-) A-I      intronic chr4:48767056(-) A-I      intronic chr4:48767055(-) A-I      intronic chr4:48767044(-) A-I      intronic chr4:48767037(-) A-I      intronic chr4:48677067(-) A-I      intronic chr4:48676691(-) A-I      intronic chr4:48676642(-) A-I      intronic chr4:48676635(-) A-I      intronic chr4:48676632(-) A-I      intronic chr4:48719805(-) A-I      intronic chr4:48673807(-) A-I      intronic chr4:48696886(-) A-I      intronic chr4:48742450(-) A-I      intronic chr4:48723462(-) A-I      intronic chr4:48725276(-) A-I      intronic chr4:48776801(-) A-I      intronic chr4:48707950(-) A-I      intronic chr4:48776835(-) A-I      intronic chr4:48679548(-) A-I      intronic chr4:48668262(-) A-I      intronic chr4:48696871(-) A-I      intronic chr4:48776673(-) A-I      intronic chr4:48710884(-) A-I      intronic chr4:48616700(-) A-I      intronic chr4:48766426(-) A-I      intronic chr4:48710905(-) A-I      intronic chr4:48780119(-) A-I      intronic chr4:48585875(-) A-I      intronic chr4:48775851(-) A-I      intronic chr4:48766929(-) A-I      intronic chr4:48772691(-) A-I      intronic chr4:48616556(-) A-I      intronic chr4:48766065(-) A-I      intronic chr4:48740661(-) A-I      intronic chr4:48669920(-) A-I      intronic chr4:48696926(-) A-I      intronic chr4:48585231(-) A-I      intronic chr4:48572030(-) A-I      intronic chr4:48697075(-) A-I      intronic chr4:48565570(-) A-I      intronic chr4:48767080(-) A-I      intronic chr4:48742414(-) A-I      intronic chr4:48697076(-) A-I      intronic chr4:48765221(-) A-I      intronic chr4:48723487(-) A-I      intronic chr4:48585297(-) A-I      intronic chr4:48742549(-) A-I      intronic chr4:48765324(-) A-I      intronic chr4:48776701(-) A-I      intronic chr4:48585876(-) A-I      intronic chr4:48756797(-) A-I      intronic chr4:48762800(-) A-I      intronic chr4:48659225(-) A-I      intronic chr4:48679584(-) A-I      intronic chr4:48697010(-) A-I      intronic chr4:48767132(-) A-I      intronic chr4:48585244(-) A-I      intronic chr4:48719844(-) A-I      intronic chr4:48762976(-) A-I      intronic chr4:48661220(-) A-I      intronic chr4:48679701(-) A-I      intronic chr4:48680188(-) A-I      intronic chr4:48766374(-) A-I      intronic chr4:48776674(-) A-I      intronic chr4:48585763(-) A-I      intronic chr4:48742554(-) A-I      intronic chr4:48616627(-) A-I      intronic chr4:48579807(-) A-I      intronic chr4:48615810(-) A-I      intronic chr4:48765331(-) A-I      intronic chr4:48668236(-) A-I      intronic chr4:48615926(-) A-I      intronic chr4:48694580(-) A-I      intronic chr4:48726085(-) A-I      intronic chr4:48725884(-) A-I      intronic chr4:48758128(-) A-I      intronic chr4:48725275(-) A-I      intronic chr4:48710762(-) A-I      intronic chr4:48679466(-) A-I      intronic chr4:48758810(-) A-I      intronic chr4:48766375(-) A-I      intronic chr4:48741161(-) A-I      intronic chr4:48766143(-) A-I      intronic chr4:48585261(-) A-I      intronic chr4:48766867(-) A-I      intronic chr4:48669803(-) A-I      intronic chr4:48585397(-) A-I      intronic chr4:48572027(-) A-I      intronic chr4:48709976(-) A-I      intronic chr4:48775773(-) A-I      intronic chr4:48585265(-) A-I      intronic chr4:48778296(-) A-I      intronic chr4:48775698(-) A-I      intronic chr4:48778247(-) A-I      intronic chr4:48711017(-) A-I      intronic chr4:48679488(-) A-I      intronic chr4:48758059(-) A-I      intronic chr4:48679556(-) A-I      intronic chr4:48696404(-) A-I      intronic chr4:48710479(-) A-I      intronic chr4:48616617(-) A-I      intronic chr4:48780064(-) A-I      intronic chr4:48719741(-) A-I      intronic chr4:48740721(-) A-I      intronic chr4:48614801(-) A-I      intronic chr4:48579859(-) A-I      intronic chr4:48762873(-) A-I      intronic chr4:48619468(-) A-I      intronic chr4:48741200(-) A-I      intronic chr4:48707978(-) A-I      intronic chr4:48616692(-) A-I      intronic chr4:48668175(-) A-I      intronic chr4:48679700(-) A-I      intronic chr4:48743207(-) A-I      intronic chr4:48775774(-) A-I      intronic chr4:48585343(-) A-I      intronic chr4:48772636(-) A-I      intronic chr4:48678537(-) A-I      intronic chr4:48719791(-) A-I      intronic chr4:48776659(-) A-I      intronic chr4:48616542(-) A-I      intronic chr4:48680401(-) A-I      intronic chr4:48616639(-) A-I      intronic chr4:48585803(-) A-I      intronic chr4:48766930(-) A-I      intronic chr4:48615886(-) A-I      intronic chr4:48679592(-) A-I      intronic chr4:48585672(-) A-I      intronic chr4:48775732(-) A-I      intronic chr4:48766181(-) A-I      intronic chr4:48725900(-) A-I      intronic chr4:48756823(-) A-I      intronic chr4:48706663(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	FRYL	chr4:48761746(-) A-G intron -    22484847 chr4:48521931(-) T-A intron -    22484847 chr4:48563926(-) T-C intron -    22484847 chr4:48572030(-) A-G intron -    22484847 chr4:48585231(-) A-G intron -    22484847 chr4:48585261(-) A-G intron -    22484847 chr4:48585297(-) A-G intron -    22484847 chr4:48585343(-) A-G intron -    22484847 chr4:48585349(-) A-G intron -    22484847 chr4:48585397(-) A-G intron -    22484847 chr4:48585763(-) A-G intron -    22484847 chr4:48585803(-) A-G intron -    22484847 chr4:48585839(-) A-G intron -    22484847 chr4:48585875(-) A-G intron -    22484847 chr4:48585876(-) A-G intron -    22484847 chr4:48585931(-) T-C intron -    22484847 chr4:48585932(-) C-T intron -    22484847 chr4:48602110(-) G-A intron -    22484847 chr4:48615744(-) C-T intron -    22484847 chr4:48615790(-) A-G intron -    22484847 chr4:48615810(-) A-G intron -    22484847 chr4:48615921(-) A-G intron -    22484847 chr4:48615926(-) A-G intron -    22484847 chr4:48615927(-) A-G intron -    22484847 chr4:48615937(-) A-G intron -    22484847 chr4:48616542(-) A-G intron -    22484847 chr4:48616639(-) A-G intron -    22484847 chr4:48619380(-) A-T intron -    22484847 chr4:48669920(-) A-G intron -    22484847 chr4:48679466(-) A-G intron -    22484847 chr4:48679488(-) A-G intron -    22484847 chr4:48679548(-) A-G intron -    22484847 chr4:48679556(-) A-G intron -    22484847 chr4:48679584(-) A-G intron -    22484847 chr4:48679592(-) A-G intron -    22484847 chr4:48679700(-) A-G intron -    22484847 chr4:48679701(-) A-G intron -    22484847 chr4:48680166(-) A-G intron -    22484847 chr4:48680188(-) A-G intron -    22484847 chr4:48680385(-) A-G intron -    22484847 chr4:48680401(-) A-G intron -    22484847 chr4:48680443(-) A-G intron -    22484847 chr4:48696403(-) A-G intron -    22484847 chr4:48696404(-) A-G intron -    22484847 chr4:48696968(-) A-G intron -    22484847 chr4:48697010(-) A-G intron -    22484847 chr4:48697075(-) A-G intron -    22484847 chr4:48697076(-) A-G intron -    22484847 chr4:48707978(-) A-G intron -    22484847 chr4:48710196(-) A-G intron -    22484847 chr4:48723487(-) A-G intron -    22484847 chr4:48725275(-) A-G intron -    22484847 chr4:48725884(-) A-G intron -    22484847 chr4:48725900(-) A-G intron -    22484847 chr4:48742443(-) A-G intron -    22484847 chr4:48742450(-) A-G intron -    22484847 chr4:48766143(-) A-G intron -    22484847 chr4:48766181(-) A-G intron -    22484847 chr4:48767080(-) A-G intron -    22484847 chr4:48772691(-) A-G intron -    22484847 chr4:48775732(-) A-G intron -    22484847 chr4:48775760(-) A-G intron -    22484847 chr4:48775822(-) A-G intron -    22484847 chr4:48775839(-) A-G intron -    22484847 chr4:48776673(-) A-G intron -    22484847 chr4:48776701(-) A-G intron -    22484847 chr4:48776764(-) A-G intron -    22484847 chr4:48776801(-) A-G intron -    22484847 chr4:48776834(-) A-G intron -    22484847 chr4:48776835(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FRYL	chr4:48499662-48499663(-) Y 3'UTR//exon       26075521 chr4:48500151-48500152(-) m6A 3'UTR//exon       25456834//24981863//26404942//27371828//22608085 chr4:48500197-48500198(-) m6A 3'UTR//exon       24284625//25456834//24981863//26404942//27773535//27371828//22608085 chr4:48500210-48500211(-) m6A 3'UTR//exon       24284625//25456834//24981863//26404942//27773535//27371828//22608085 chr4:48500245-48500246(-) m6A 3'UTR//exon       24284625//25456834//24981863//26404942//27773535//27371828//22608085 chr4:48500269-48500270(-) m6A 3'UTR//exon       24284625//25456834//24981863//26404942//27773535//27371828//22608085 chr4:48500666-48500667(-) m6A 3'UTR//exon       27773535 chr4:48500687-48500688(-) m6A 3'UTR//exon       27773535 chr4:48500919-48500920(-) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr4:48500933-48500934(-) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr4:48500959-48500960(-) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085 chr4:48500999-48501000(-) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085 chr4:48501034-48501035(-) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085 chr4:48501091-48501092(-) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085 chr4:48501270-48501271(-) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr4:48501291-48501292(-) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr4:48501306-48501307(-) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr4:48501366-48501367(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr4:48501407-48501408(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr4:48501412-48501413(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr4:48501436-48501437(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr4:48501471-48501472(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr4:48501537-48501538(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr4:48501546-48501547(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr4:48501568-48501569(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr4:48501602-48501603(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr4:48501644-48501645(-) m6A CDS//exon       24284625//24209618//24981863//28052920//27773535//27371828//22608085 chr4:48502098-48502099(-) m6A CDS//exon       24981863//27773535//22608085 chr4:48502122-48502123(-) m6A CDS//exon       24981863//27773535//22608085 chr4:48502134-48502135(-) m6A CDS//exon       - chr4:48523194-48523195(-) m6A 5'UTR//CDS//exon       - chr4:48523204-48523205(-) m6A 5'UTR//CDS//exon       - chr4:48523227-48523228(-) m6A 5'UTR//CDS//exon       27773535 chr4:48525002-48525003(-) m6A 5'UTR//CDS//exon       27773535 chr4:48525053-48525054(-) m6A 5'UTR//CDS//exon       - chr4:48525071-48525072(-) m6A 5'UTR//CDS//exon       - chr4:48542400-48542401(-) m6A 5'UTR//CDS//exon       24284625//24981863//27773535//22608085 chr4:48542418-48542419(-) m6A 5'UTR//CDS//exon       24284625//24981863//27773535//22575960//22608085 chr4:48542490-48542491(-) m6A 5'UTR//CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085 chr4:48542504-48542505(-) m6A 5'UTR//CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085 chr4:48542580-48542581(-) m6A 5'UTR//CDS//exon       24284625//24209618//24981863//27773535//22608085 chr4:48542738-48542739(-) m6A 5'UTR//CDS//exon       24284625//24209618//24981863//27773535//22608085 chr4:48542761-48542762(-) m6A 5'UTR//CDS//exon       24284625//24209618//24981863//27773535//22608085 chr4:48542916-48542917(-) m6A 5'UTR//CDS//exon       24981863//27773535//22608085 chr4:48542947-48542948(-) m6A 5'UTR//CDS//exon       24981863 chr4:48549631-48549632(-) m6A 5'UTR//CDS//exon       - chr4:48559064-48559065(-) m6A 5'UTR//CDS       24209618 chr4:48559092-48559093(-) m6A 5'UTR//CDS       24209618 chr4:48782104-48782105(-) m6A 5'UTR//exon       24284625//24981863//27371828 chr4:48782141-48782142(-) m6A 5'UTR//exon       24284625//24981863//27371828 chr4:48782311-48782312(-) m6A 5'UTR//exon       24284625//24981863//27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	FRYL	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Membrane HCC cell line (HepG2)|K562 cells     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H5-3p
Interactor2: FRYL

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg