Basic Information:

  VIRBase ID:  

VHID00095953

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H5-3p:  MIMAT0008403          KSR2:  NM_173598     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H5-3p	KSR2
miRBase Accession/Entrez ID	MIMAT0008403	283455
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	KSR2	chr12:118226418(-) A-I      intronic chr12:118226445(-) A-I      intronic chr12:117972728(-) A-I      intronic chr12:118396566(-) A-I      intronic chr12:118289639(-) A-I      intronic chr12:118226405(-) A-I      intronic chr12:118226404(-) A-I      intronic chr12:118396569(-) A-I      intronic chr12:118388357(-) A-I      intronic chr12:118398753(-) A-I      intronic chr12:118369968(-) A-I      intronic chr12:118241977(-) A-I      intronic chr12:118340194(-) A-I      intronic chr12:118368033(-) A-I      intronic chr12:118354206(-) A-I      intronic chr12:118373308(-) A-I      intronic chr12:118370087(-) A-I      intronic chr12:118354215(-) A-I      intronic chr12:118291220(-) A-I      intronic chr12:118136386(-) A-I      intronic chr12:118311371(-) A-I      intronic chr12:118392713(-) A-I      intronic chr12:118373872(-) A-I      intronic chr12:118374260(-) A-I      intronic chr12:118373080(-) A-I      intronic chr12:118361766(-) A-I      intronic chr12:118400443(-) A-I      intronic chr12:118282851(-) A-I      intronic chr12:118278403(-) A-I      intronic chr12:118376455(-) A-I      intronic chr12:118278333(-) A-I      intronic chr12:118282695(-) A-I      intronic chr12:118361342(-) A-I      intronic chr12:118378656(-) A-I      intronic chr12:118331061(-) A-I      intronic chr12:118361321(-) A-I      intronic chr12:118230098(-) A-I      intronic chr12:118373104(-) A-I      intronic chr12:118029767(-) A-I      intronic chr12:118386042(-) A-I      intronic chr12:118278274(-) A-I      intronic chr12:118393180(-) A-I      intronic chr12:118383392(-) A-I      intronic chr12:118398823(-) A-I      intronic chr12:118248317(-) A-I      intronic chr12:118374052(-) A-I      intronic chr12:118073824(-) A-I      intronic chr12:118300705(-) A-I      intronic chr12:118393096(-) A-I      intronic chr12:118378767(-) A-I      intronic chr12:118242019(-) A-I      intronic chr12:118291912(-) A-I      intronic chr12:118401866(-) A-I      intronic chr12:118132949(-) A-I      intronic chr12:118008860(-) A-I      intronic chr12:118283767(-) A-I      intronic chr12:118400482(-) A-I      intronic chr12:118304941(-) A-I      intronic chr12:118370089(-) A-I      intronic chr12:118283759(-) A-I      intronic chr12:118137730(-) A-I      intronic chr12:118314924(-) A-I      intronic chr12:118248390(-) A-I      intronic chr12:118300807(-) A-I      intronic chr12:117967704(-) A-I      intronic chr12:118397479(-) A-I      intronic chr12:118394273(-) A-I      intronic chr12:118216182(-) A-I      intronic chr12:118379560(-) A-I      intronic chr12:118233794(-) A-I      intronic chr12:118388829(-) A-I      intronic chr12:118340135(-) A-I      intronic chr12:118361886(-) A-I      intronic chr12:118395884(-) A-I      intronic chr12:118077182(-) A-I      intronic chr12:118380348(-) A-I      intronic chr12:118399739(-) A-I      intronic chr12:118073878(-) A-I      intronic chr12:118366157(-) A-I      intronic chr12:118325106(-) A-I      intronic chr12:118378833(-) A-I      intronic chr12:118171851(-) A-I      intronic chr12:118271905(-) A-I      intronic chr12:118373320(-) A-I      intronic chr12:118373524(-) A-I      intronic chr12:118379499(-) A-I      intronic chr12:118378827(-) A-I      intronic chr12:118340187(-) A-I      intronic chr12:118398844(-) A-I      intronic chr12:118400366(-) A-I      intronic chr12:118401920(-) A-I      intronic chr12:118398835(-) A-I      intronic chr12:118377663(-) A-I      intronic chr12:118241920(-) A-I      intronic chr12:118388065(-) A-I      intronic chr12:118393099(-) A-I      intronic chr12:118398798(-) A-I      intronic chr12:118386642(-) A-I      intronic chr12:118392658(-) A-I      intronic chr12:118290011(-) A-I      intronic chr12:118373943(-) A-I      intronic chr12:118392995(-) A-I      intronic chr12:118373973(-) A-I      intronic chr12:118398694(-) A-I      intronic chr12:118398885(-) A-I      intronic chr12:118288499(-) A-I      intronic chr12:118278720(-) A-I      intronic chr12:117952451(-) A-I      intronic chr12:118363026(-) A-I      intronic chr12:118398817(-) A-I      intronic chr12:118291948(-) A-I      intronic chr12:118380577(-) A-I      intronic chr12:118077195(-) A-I      intronic chr12:118233792(-) A-I      intronic chr12:117952492(-) A-I      intronic chr12:118147305(-) A-I      intronic chr12:118379504(-) A-I      intronic chr12:118358104(-) A-I      intronic chr12:118289613(-) A-I      intronic chr12:118291208(-) A-I      intronic chr12:118289985(-) A-I      intronic chr12:118132926(-) A-I      intronic chr12:118378778(-) A-I      intronic chr12:118376439(-) A-I      intronic chr12:118365457(-) A-I      intronic chr12:118358077(-) A-I      intronic chr12:118392759(-) A-I      intronic chr12:118376498(-) A-I      intronic chr12:118366144(-) A-I      intronic chr12:118393130(-) A-I      intronic chr12:118337080(-) A-I      intronic chr12:118400912(-) A-I      intronic chr12:118401232(-) A-I      intronic chr12:118009027(-) A-I      intronic chr12:118123982(-) A-I      intronic chr12:118248306(-) A-I      intronic chr12:118388416(-) A-I      intronic chr12:118372923(-) A-I      intronic chr12:118373347(-) A-I      intronic chr12:118289176(-) A-I      intronic chr12:118209441(-) A-I      intronic chr12:118323104(-) A-I      intronic chr12:118204876(-) A-I      intronic chr12:118393030(-) A-I      intronic chr12:118399850(-) A-I      intronic chr12:118365943(-) A-I      intronic chr12:118208880(-) A-I      intronic chr12:118278551(-) A-I      intronic chr12:118283610(-) A-I      intronic chr12:118290098(-) A-I      intronic chr12:118241944(-) A-I      intronic chr12:118070303(-) A-I      intronic chr12:118278744(-) A-I      intronic chr12:118208891(-) A-I      intronic chr12:118076695(-) A-I      intronic chr12:118399778(-) A-I      intronic chr12:118324867(-) A-I      intronic chr12:118359305(-) A-I      intronic chr12:117967159(-) A-I      intronic chr12:118029751(-) A-I      intronic chr12:118068953(-) A-I      intronic chr12:118359315(-) A-I      intronic chr12:118284304(-) A-I      intronic chr12:118352054(-) A-I      intronic chr12:118139177(-) A-I      intronic chr12:118397564(-) A-I      intronic chr12:118398745(-) A-I      intronic chr12:118368473(-) A-I      intronic chr12:118378769(-) A-I      intronic chr12:118367574(-) A-I      intronic chr12:118388797(-) A-I      intronic chr12:118371255(-) A-I      intronic chr12:118197212(-) A-I      intronic chr12:118395902(-) A-I      intronic chr12:118340225(-) A-I      intronic chr12:118398807(-) A-I      intronic chr12:118127655(-) A-I      intronic chr12:118204781(-) A-I      intronic chr12:118278543(-) A-I      intronic chr12:118008859(-) A-I      intronic chr12:118081028(-) A-I      intronic chr12:118344302(-) A-I      intronic chr12:117970268(-) A-I      intronic chr12:118380591(-) A-I      intronic chr12:118398665(-) A-I      intronic chr12:118365385(-) A-I      intronic chr12:118398743(-) A-I      intronic chr12:118393143(-) A-I      intronic chr12:118230069(-) A-I      intronic chr12:118374027(-) A-I      intronic chr12:118368715(-) A-I      intronic chr12:118300806(-) A-I      intronic chr12:118379505(-) A-I      intronic chr12:118337125(-) A-I      intronic chr12:118379694(-) A-I      intronic chr12:118400913(-) A-I      intronic chr12:118372879(-) A-I      intronic chr12:118209419(-) A-I      intronic chr12:117970239(-) A-I      intronic chr12:118392722(-) A-I      intronic chr12:117979976(-) A-I      intronic chr12:117903775(-) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	KSR2	chr12:117904673-117904674(-) m6A 3'UTR       27371828 chr12:117904680-117904681(-) m6A 3'UTR       25456834//27371828 chr12:117904686-117904687(-) m6A 3'UTR       25456834//27371828 chr12:117904738-117904739(-) m6A 3'UTR       25456834//24981863//27371828//22608085 chr12:117904780-117904781(-) m6A 3'UTR       25456834//24981863//27371828//22608085 chr12:117904785-117904786(-) m6A 3'UTR       25456834//24981863//27371828//22608085 chr12:117904790-117904791(-) m6A 3'UTR       25456834//24981863//27371828//22608085 chr12:117904804-117904805(-) m6A 3'UTR       25456834//24981863//27371828//22608085 chr12:117904836-117904837(-) m6A 3'UTR       25456834//24981863//27371828//22608085 chr12:117904867-117904868(-) m6A 3'UTR       25456834//27371828//22608085 chr12:117904913-117904914(-) m6A 3'UTR       27371828//22608085 chr12:117962726-117962727(-) m6A CDS//exon       27371828 chr12:117962770-117962771(-) m6A CDS//exon       27371828 chr12:117962779-117962780(-) m6A CDS//exon       27371828 chr12:117962896-117962897(-) m6A CDS//exon       27371828 chr12:117962921-117962922(-) m6A CDS//exon       27371828 chr12:118198910-118198911(-) m6A CDS       27371828 chr12:118198933-118198934(-) m6A CDS       27371828 chr12:118198953-118198954(-) m6A CDS       27371828 chr12:118405888-118405889(-) m6A CDS       27371828 chr12:118405933-118405934(-) m6A CDS       27371828 chr12:118405965-118405966(-) m6A CDS       27371828//22608085 chr12:118405974-118405975(-) m6A 5'UTR//CDS       27371828//22608085 chr12:118405985-118405986(-) m6A 5'UTR//CDS       27371828//22608085 chr12:118406046-118406047(-) m6A CDS       27371828//22608085 chr12:118406131-118406132(-) m6A 5'UTR       27371828 chr12:118406173-118406174(-) m6A 5'UTR       27371828 chr12:118406292-118406293(-) m6A 5'UTR       27371828 chr12:118406309-118406310(-) m6A 5'UTR       27371828 chr12:118406316-118406317(-) m6A 5'UTR       27371828 chr12:118406338-118406339(-) m6A 5'UTR       27371828 chr12:118406371-118406372(-) m6A 5'UTR       27371828 chr12:118406563-118406564(-) m6A 5'UTR       27371828 chr12:118406598-118406599(-) m6A 5'UTR       27371828 chr12:118406605-118406606(-) m6A 5'UTR       27371828 chr12:118406638-118406639(-) m6A 5'UTR       27371828 chr12:118406684-118406685(-) m6A 5'UTR       27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	KSR2	Cytosol HeLa-S3 cells     - Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H5-3p
Interactor2: KSR2

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg