Basic Information:

  VIRBase ID:  

VHID00095937

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H5-3p:  MIMAT0008403          ALS2CL:  NM_001190707     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H5-3p	ALS2CL
miRBase Accession/Entrez ID	MIMAT0008403	259173
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	RN49018

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ALS2CL	chr3:46710717-46710718(-) m6A 3'UTR//exon       25456834//24981863 chr3:46710740-46710741(-) m6A 3'UTR//exon       25456834//24981863//27371828 chr3:46710754-46710755(-) m6A 3'UTR//exon       25456834//24981863//27371828 chr3:46710818-46710819(-) m6A 3'UTR//exon       25456834//24981863//27773535//27371828 chr3:46710929-46710930(-) m6A 3'UTR//exon       27773535//27371828 chr3:46710986-46710987(-) m6A 3'UTR//exon       27773535 chr3:46711058-46711059(-) m6A 3'UTR//exon       25456834 chr3:46711764-46711765(-) m6A 3'UTR//exon       27773535 chr3:46711771-46711772(-) m6A 3'UTR//exon       27773535 chr3:46711778-46711779(-) m6A 3'UTR//exon       27773535 chr3:46711786-46711787(-) m6A 3'UTR//exon       27773535 chr3:46711828-46711829(-) m6A 3'UTR//exon       27773535 chr3:46711899-46711900(-) m6A 3'UTR//exon       22575960 chr3:46711965-46711966(-) m6A 3'UTR//exon       25456834//24981863//22575960 chr3:46712057-46712058(-) m6A 3'UTR//exon       24284625//25456834//24981863//22575960//22608085 chr3:46712099-46712100(-) m6A 3'UTR//exon       25456834//24981863 chr3:46712393-46712394(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27371828 chr3:46712457-46712458(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27371828 chr3:46712525-46712526(-) m6A 3'UTR//CDS//exon       24209618//25456834//24981863//27773535 chr3:46713026-46713027(-) m6A 3'UTR//CDS//exon       24209618//27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ALS2CL	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H5-3p
Interactor2: ALS2CL

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg