Basic Information:

  VIRBase ID:  

VHID00095900

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H5-3p:  MIMAT0008403          NYAP1:  NM_173564     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H5-3p	NYAP1
miRBase Accession/Entrez ID	MIMAT0008403	222950
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C7orf51

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NYAP1	chr7:100085524(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NYAP1	chr7:100082860-100082861(+) m6A 5'UTR       - chr7:100082938-100082939(+) m6A CDS       - chr7:100084649-100084650(+) m6A CDS       - chr7:100084697-100084698(+) m6A CDS       24284625//25456834 chr7:100084713-100084714(+) m6A CDS       24284625//25456834 chr7:100084734-100084735(+) m6A CDS       24284625//25456834 chr7:100085912-100085913(+) m6A CDS       25456834 chr7:100085957-100085958(+) m6A CDS       25456834 chr7:100086101-100086102(+) m6A CDS       24284625//25456834 chr7:100086295-100086296(+) m6A CDS       24284625//25456834//24981863 chr7:100086388-100086389(+) m6A CDS       24284625//25456834 chr7:100086707-100086708(+) m6A CDS       25456834 chr7:100086874-100086875(+) m6A CDS       25456834 chr7:100086959-100086960(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr7:100086991-100086992(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr7:100087023-100087024(+) m6A CDS       24284625//25456834//24981863//22608085 chr7:100087126-100087127(+) m6A CDS       25456834 chr7:100087183-100087184(+) m6A CDS       25456834 chr7:100087199-100087200(+) m1A CDS       26863196 chr7:100087286-100087287(+) m6A CDS       24209618//25456834 chr7:100088205-100088206(+) m6A CDS//exon       24209618//25456834 chr7:100088219-100088220(+) m6A CDS//exon       24209618//25456834 chr7:100088257-100088258(+) m6A CDS//exon       25456834 chr7:100088283-100088284(+) m6A CDS//exon       25456834 chr7:100088324-100088325(+) m6A CDS//exon       - chr7:100088608-100088609(+) m6A CDS//exon       - chr7:100091398-100091399(+) m6A CDS//exon       25456834 chr7:100091453-100091454(+) m6A CDS//exon       25456834 chr7:100091512-100091513(+) m6A CDS//exon       25456834 chr7:100091555-100091556(+) m6A 3'UTR//exon       25456834//24981863 chr7:100091607-100091608(+) m6A 3'UTR//exon       25456834//24981863 chr7:100091617-100091618(+) m6A 3'UTR//exon       25456834//24981863 chr7:100091642-100091643(+) m6A 3'UTR//exon       25456834//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NYAP1	Exosome Blood     - Nucleolus K562 cells     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H5-3p
Interactor2: NYAP1

Evidence Support:

Prediction-Evidence	cRep//miRanda//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg