Basic Information:

  VIRBase ID:  

VHID00095818

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H5-3p:  MIMAT0008403          PLBD2:  NM_001159727     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H5-3p	PLBD2
miRBase Accession/Entrez ID	MIMAT0008403	196463
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	P76

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PLBD2	chr12:113815950(+) A-I      intronic chr12:113815946(+) A-I      intronic chr12:113815945(+) A-I      intronic chr12:113815941(+) A-I      intronic chr12:113801120(+) A-I      intronic chr12:113801142(+) A-I      intronic chr12:113816018(+) A-I      intronic chr12:113802514(+) A-I      intronic chr12:113802541(+) A-I      intronic chr12:113815873(+) A-I      intronic chr12:113815935(+) A-I      intronic chr12:113815936(+) A-I      intronic chr12:113815938(+) A-I      intronic chr12:113802547(+) A-I      intronic chr12:113802550(+) A-I      intronic chr12:113802554(+) A-I      intronic chr12:113805664(+) A-I      intronic chr12:113815386(+) A-I      intronic chr12:113803302(+) A-I      intronic chr12:113816009(+) A-I      intronic chr12:113821648(+) A-I      intronic chr12:113821646(+) A-I      intronic chr12:113821628(+) A-I      intronic chr12:113803245(+) A-I      intronic chr12:113800097(+) A-I      intronic chr12:113816836(+) A-I      intronic chr12:113816993(+) A-I      intronic chr12:113816656(+) A-I      intronic chr12:113799975(+) A-I      intronic chr12:113804808(+) A-I      intronic chr12:113805725(+) A-I      intronic chr12:113803196(+) A-I      intronic chr12:113821639(+) A-I      intronic chr12:113799902(+) A-I      intronic chr12:113815279(+) A-I      intronic chr12:113800719(+) A-I      intronic chr12:113808802(+) A-I      intronic chr12:113804805(+) A-I      intronic chr12:113813068(+) A-I      intronic chr12:113799996(+) A-I      intronic chr12:113816952(+) A-I      intronic chr12:113801080(+) A-I      intronic chr12:113821684(+) A-I      intronic chr12:113817506(+) A-I      intronic chr12:113816948(+) A-I      intronic chr12:113817045(+) A-I      intronic chr12:113813025(+) A-I      intronic chr12:113802469(+) A-I      intronic chr12:113820309(+) A-I      intronic chr12:113821696(+) A-I      intronic chr12:113800853(+) A-I      intronic chr12:113803248(+) A-I      intronic chr12:113816419(+) A-I      intronic chr12:113799941(+) A-I      intronic chr12:113800077(+) A-I      intronic chr12:113816686(+) A-I      intronic chr12:113800610(+) A-I      intronic chr12:113816858(+) A-I      intronic chr12:113800651(+) A-I      intronic chr12:113800731(+) A-I      intronic chr12:113801011(+) A-I      intronic chr12:113801094(+) A-I      intronic chr12:113801056(+) A-I      intronic chr12:113801078(+) A-I      intronic chr12:113821567(+) A-I      intronic chr12:113801102(+) A-I      intronic chr12:113803268(+) A-I      intronic chr12:113803324(+) A-I      intronic chr12:113803339(+) A-I      intronic chr12:113803353(+) A-I      intronic chr12:113803354(+) A-I      intronic chr12:113804470(+) A-I      intronic chr12:113804537(+) A-I      intronic chr12:113805354(+) A-I      intronic chr12:113805711(+) A-I      intronic chr12:113805798(+) A-I      intronic chr12:113807804(+) A-I      intronic chr12:113807885(+) A-I      intronic chr12:113807888(+) A-I      intronic chr12:113807890(+) A-I      intronic chr12:113808842(+) A-I      intronic chr12:113808881(+) A-I      intronic chr12:113813012(+) A-I      intronic chr12:113813247(+) A-I      intronic chr12:113815294(+) A-I      intronic chr12:113815311(+) A-I      intronic chr12:113821423(+) A-I      intronic chr12:113802327(+) A-I      intronic chr12:113815324(+) A-I      intronic chr12:113815360(+) A-I      intronic chr12:113815372(+) A-I      intronic chr12:113815414(+) A-I      intronic chr12:113815913(+) A-I      intronic chr12:113815970(+) A-I      intronic chr12:113815976(+) A-I      intronic chr12:113815986(+) A-I      intronic chr12:113816672(+) A-I      intronic chr12:113800984(+) A-I      intronic chr12:113816753(+) A-I      intronic chr12:113816983(+) A-I      intronic chr12:113817569(+) A-I      intronic chr12:113820746(+) A-I      intronic chr12:113820757(+) A-I      intronic chr12:113820776(+) A-I      intronic chr12:113821301(+) A-I      intronic chr12:113821381(+) A-I      intronic chr12:113821397(+) A-I      intronic chr12:113821405(+) A-I      intronic chr12:113821425(+) A-I      intronic chr12:113821603(+) A-I      intronic chr12:113821608(+) A-I      intronic chr12:113821786(+) A-I      intronic chr12:113821797(+) A-I      intronic chr12:113802529(+) A-I      intronic chr12:113808826(+) A-I      intronic chr12:113815295(+) A-I      intronic chr12:113813014(+) A-I      intronic chr12:113801134(+) A-I      intronic chr12:113803392(+) A-I      intronic chr12:113808786(+) A-I      intronic chr12:113808740(+) A-I      intronic chr12:113813004(+) A-I      intronic chr12:113805424(+) A-I      intronic chr12:113805709(+) A-I      intronic chr12:113815932(+) A-I      intronic chr12:113800614(+) A-I      intronic chr12:113805837(+) A-I      intronic chr12:113799922(+) A-I      intronic chr12:113799439(+) A-I      intronic chr12:113805802(+) A-I      intronic chr12:113801087(+) A-I      intronic chr12:113826067(+) A-I      intronic chr12:113807805(+) A-I      intronic chr12:113816669(+) A-I      intronic chr12:113821724(+) A-I      intronic chr12:113814528(+) A-I      intronic chr12:113805632(+) A-I      intronic chr12:113815911(+) A-I      intronic chr12:113808845(+) A-I      intronic chr12:113805326(+) A-I      intronic chr12:113816429(+) A-I      intronic chr12:113815348(+) A-I      intronic chr12:113816856(+) A-I      intronic chr12:113807728(+) A-I      intronic chr12:113805726(+) A-I      intronic chr12:113821725(+) A-I      intronic chr12:113817496(+) A-I      intronic chr12:113816709(+) A-I      intronic chr12:113802502(+) A-I      intronic chr12:113814501(+) A-I      intronic chr12:113821379(+) A-I      intronic chr12:113821420(+) A-I      intronic chr12:113801175(+) A-I      intronic chr12:113805766(+) A-I      intronic chr12:113814542(+) A-I      intronic chr12:113807785(+) A-I      intronic chr12:113804725(+) A-I      intronic chr12:113800141(+) A-I      intronic chr12:113805672(+) A-I      intronic chr12:113815405(+) A-I      intronic chr12:113799896(+) A-I      intronic chr12:113814568(+) A-I      intronic chr12:113800061(+) A-I      intronic chr12:113816937(+) A-I      intronic chr12:113802519(+) A-I      intronic chr12:113800004(+) A-I      intronic chr12:113804706(+) A-I      intronic chr12:113821357(+) A-I      intronic chr12:113805469(+) A-I      intronic chr12:113808384(+) A-I      intronic chr12:113800985(+) A-I      intronic chr12:113799895(+) A-I      intronic chr12:113820379(+) A-I      intronic chr12:113801616(+) A-I      intronic chr12:113805767(+) A-I      intronic chr12:113800689(+) A-I      intronic chr12:113821591(+) A-I      intronic chr12:113808335(+) A-I      intronic chr12:113808741(+) A-I      intronic chr12:113804766(+) A-I      intronic chr12:113821714(+) A-I      intronic chr12:113807798(+) A-I      intronic chr12:113815289(+) A-I      intronic chr12:113808518(+) A-I      intronic chr12:113800629(+) A-I      intronic chr12:113808781(+) A-I      intronic chr12:113805393(+) A-I      intronic chr12:113804400(+) A-I      intronic chr12:113815968(+) A-I      intronic chr12:113813044(+) A-I      intronic chr12:113804368(+) A-I      intronic chr12:113815418(+) A-I      intronic chr12:113816428(+) A-I      intronic chr12:113804764(+) A-I      intronic chr12:113799882(+) A-I      intronic chr12:113800007(+) A-I      intronic chr12:113799965(+) A-I      intronic chr12:113800707(+) A-I      intronic chr12:113815417(+) A-I      intronic chr12:113805434(+) A-I      intronic chr12:113817020(+) A-I      intronic chr12:113816017(+) A-I      intronic chr12:113804823(+) A-I      intronic chr12:113816935(+) A-I      intronic chr12:113800729(+) A-I      intronic chr12:113805819(+) A-I      intronic chr12:113817101(+) A-I      intronic chr12:113815330(+) A-I      intronic chr12:113799281(+) A-I      intronic chr12:113815847(+) A-I      intronic chr12:113813240(+) A-I      intronic chr12:113802310(+) A-I      intronic chr12:113803152(+) A-I      intronic chr12:113816982(+) A-I      intronic chr12:113816630(+) A-I      intronic chr12:113805722(+) A-I      intronic chr12:113821613(+) A-I      intronic chr12:113816755(+) A-I      intronic chr12:113814567(+) A-I      intronic chr12:113808806(+) A-I      intronic chr12:113804767(+) A-I      intronic chr12:113805654(+) A-I      intronic chr12:113800084(+) A-I      intronic chr12:113805506(+) A-I      intronic chr12:113817497(+) A-I      intronic chr12:113808325(+) A-I      intronic chr12:113799294(+) A-I      intronic chr12:113816934(+) A-I      intronic chr12:113816029(+) A-I      intronic chr12:113813219(+) A-I      intronic chr12:113802673(+) A-I      intronic chr12:113814547(+) A-I      intronic chr12:113808362(+) A-I      intronic chr12:113816951(+) A-I      intronic chr12:113821653(+) A-I      intronic chr12:113804343(+) A-I      intronic chr12:113805511(+) A-I      intronic chr12:113820434(+) A-I      intronic chr12:113815331(+) A-I      intronic chr12:113818147(+) A-I      intronic chr12:113805708(+) A-I      intronic chr12:113813050(+) A-I      intronic chr12:113804545(+) A-I      intronic chr12:113801137(+) A-I      intronic chr12:113815869(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PLBD2	chr12:113804706(+) A-G intron -    22484847 chr12:113804764(+) A-G intron -    22484847 chr12:113804767(+) A-G intron -    22484847 chr12:113821379(+) A-G intron -    22484847 chr12:113800614(+) A-G intron -    22484847 chr12:113800629(+) A-G intron -    22484847 chr12:113800853(+) A-G intron -    22484847 chr12:113800984(+) A-G intron -    22484847 chr12:113800985(+) A-G intron -    22484847 chr12:113802519(+) A-G intron -    22484847 chr12:113802529(+) A-G intron -    22484847 chr12:113804400(+) A-G intron -    22484847 chr12:113804545(+) A-G intron -    22484847 chr12:113804725(+) A-G intron -    22484847 chr12:113804766(+) A-G intron -    22484847 chr12:113804808(+) A-G intron -    22484847 chr12:113804823(+) A-G intron -    22484847 chr12:113807805(+) A-G intron -    22484847 chr12:113808335(+) A-G intron -    22484847 chr12:113808802(+) A-G intron -    22484847 chr12:113808845(+) A-G intron -    22484847 chr12:113813044(+) A-G intron -    22484847 chr12:113814542(+) A-G intron -    22484847 chr12:113814547(+) A-G intron -    22484847 chr12:113815279(+) A-G intron -    22484847 chr12:113815289(+) A-G intron -    22484847 chr12:113815295(+) A-G intron -    22484847 chr12:113815330(+) A-G intron -    22484847 chr12:113815331(+) A-G intron -    22484847 chr12:113815417(+) A-G intron -    22484847 chr12:113815869(+) A-G intron -    22484847 chr12:113816686(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PLBD2	chr12:113826324-113826325(+) m6A CDS       24284625//22575960 chr12:113826390-113826391(+) m6A CDS       24284625//22575960 chr12:113826426-113826427(+) m6A CDS       24284625//22575960 chr12:113826504-113826505(+) m6A 3'UTR       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PLBD2	Chromatin K562 cells     - Cytosol HeLa-S3 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H5-3p
Interactor2: PLBD2

Evidence Support:

Prediction-Evidence	cRep//miRanda//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg