Basic Information:

  VIRBase ID:  

VHID00095778

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H5-3p:  MIMAT0008403          CITED4:  NM_133467     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H5-3p	CITED4
miRBase Accession/Entrez ID	MIMAT0008403	163732
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CITED4	chr1:41326740-41326741(-) m6A 3'UTR       24284625//24981863 chr1:41326751-41326752(-) m6A 3'UTR       24284625//24981863 chr1:41326784-41326785(-) m6A 3'UTR       24284625//24981863 chr1:41326985-41326986(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22575960//22608085 chr1:41327003-41327004(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22575960//22608085 chr1:41327008-41327009(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22575960//22608085 chr1:41327059-41327060(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22575960//22608085 chr1:41327097-41327098(-) m6A 3'UTR       24284625//25456834//24981863//27371828//22575960//22608085 chr1:41327103-41327104(-) m6A 3'UTR       24284625//25456834//24981863//27371828//22575960//22608085 chr1:41327185-41327186(-) m6A 3'UTR       24284625//25456834//24981863//27773536//22575960 chr1:41327284-41327285(-) m6A CDS       25456834//24981863//27773536//22575960 chr1:41327394-41327395(-) m6A CDS       25456834//24981863//22575960 chr1:41327677-41327678(-) m6A CDS       25456834//24981863//22575960 chr1:41327708-41327709(-) m6A CDS       25456834//24981863//22575960 chr1:41327904-41327905(-) m6A 5'UTR       24284625//24981863//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CITED4	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H5-3p
Interactor2: CITED4

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg