Detail Information

Basic Information:


  VIRBase ID:  

VHID00095580

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H5-3p:           DRAM2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H5-3p DRAM2
miRBase
Accession/Entrez ID		 MIMAT0008403 128338
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - CORD21//PRO180//TMEM77//WWFQ154

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR DRAM2
chr1:111679487(-) A-I      intronic
chr1:111675406(-) A-I      intronic
chr1:111675388(-) A-I      intronic
chr1:111675387(-) A-I      intronic
chr1:111675397(-) A-I      intronic
chr1:111679751(-) A-I      intronic
chr1:111679743(-) A-I      intronic
chr1:111679686(-) A-I      intronic
chr1:111675932(-) A-I      intronic
chr1:111679514(-) A-I      intronic
chr1:111679160(-) A-I      intronic
chr1:111679474(-) A-I      intronic
chr1:111679763(-) A-I      intronic
chr1:111675970(-) A-I      intronic
chr1:111678944(-) A-I      intronic
chr1:111675889(-) A-I      intronic
chr1:111679484(-) A-I      intronic
chr1:111675551(-) A-I      intronic
chr1:111679488(-) A-I      intronic
chr1:111679075(-) A-I      intronic
chr1:111675975(-) A-I      intronic
chr1:111679039(-) A-I      intronic
chr1:111675937(-) A-I      intronic
chr1:111675575(-) A-I      intronic
chr1:111675876(-) A-I      intronic
chr1:111675577(-) A-I      intronic
chr1:111675924(-) A-I      intronic
chr1:111675574(-) A-I      intronic
chr1:111679447(-) A-I      intronic
chr1:111679625(-) A-I      intronic
chr1:111676064(-) A-I      intronic
chr1:111675977(-) A-I      intronic
chr1:111679155(-) A-I      intronic
chr1:111675994(-) A-I      intronic
chr1:111679124(-) A-I      intronic
chr1:111676003(-) A-I      intronic
chr1:111679065(-) A-I      intronic
chr1:111675469(-) A-I      intronic
chr1:111679753(-) A-I      intronic
chr1:111675896(-) A-I      intronic
chr1:111676004(-) A-I      intronic
chr1:111679038(-) A-I      intronic
chr1:111679144(-) A-I      intronic
chr1:111675969(-) A-I      intronic
chr1:111679479(-) A-I      intronic
chr1:111676086(-) A-I      intronic
chr1:111675979(-) A-I      intronic
chr1:111675432(-) A-I      intronic
chr1:111675988(-) A-I      intronic
chr1:111679513(-) A-I      intronic
chr1:111679539(-) A-I      intronic
chr1:111675911(-) A-I      intronic
chr1:111676073(-) A-I      intronic
chr1:111679112(-) A-I      intronic
chr1:111675928(-) A-I      intronic
chr1:111679429(-) A-I      intronic
chr1:111679086(-) A-I      intronic
chr1:111675436(-) A-I      intronic
chr1:111681343(-) A-I      intronic
chr1:111675872(-) A-I      intronic
chr1:111675946(-) A-I      intronic
chr1:111676075(-) A-I      intronic
chr1:111676072(-) A-I      intronic
chr1:111679092(-) A-I      intronic
chr1:111675364(-) A-I      intronic
chr1:111675964(-) A-I      intronic
chr1:111679518(-) A-I      intronic
chr1:111679021(-) A-I      intronic
chr1:111675948(-) A-I      intronic
chr1:111675973(-) A-I      intronic
chr1:111679069(-) A-I      intronic
chr1:111667726(-) A-I      intronic
chr1:111675376(-) A-I      intronic
chr1:111675827(-) A-I      intronic
chr1:111675982(-) A-I      intronic
chr1:111675978(-) A-I      intronic
chr1:111679145(-) A-I      intronic
chr1:111679087(-) A-I      intronic
chr1:111675500(-) A-I      intronic
chr1:111679544(-) A-I      intronic
chr1:111675938(-) A-I      intronic
chr1:111675505(-) A-I      intronic
chr1:111679007(-) A-I      intronic
chr1:111675581(-) A-I      intronic
chr1:111678995(-) A-I      intronic
chr1:111676027(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED DRAM2
chr1:111675827(-) A-I intron -    15258596
chr1:111675872(-) A-I intron -    15258596
chr1:111675876(-) A-I intron -    15258596
chr1:111675911(-) A-I intron -    15258596
chr1:111675924(-) A-I intron -    15258596
chr1:111675928(-) A-I intron -    15258596
chr1:111675937(-) A-I intron -    15258596   //22327324
chr1:111675946(-) A-I intron -    15258596
chr1:111675948(-) A-I intron -    15258596
chr1:111675964(-) A-I intron -    15258596   //22327324
chr1:111675969(-) A-I intron -    15258596
chr1:111675973(-) A-I intron -    15258596
chr1:111675977(-) A-I intron -    15258596
chr1:111676003(-) A-I intron -    22327324
chr1:111673321(-) G-T intron -    22484847
chr1:111673619(-) C-T intron -    22484847
chr1:111675436(-) A-G intron -    22484847
chr1:111675876(-) A-G intron -    22484847
chr1:111675911(-) A-G intron -    22484847
chr1:111675937(-) A-G intron -    22484847
chr1:111675938(-) A-G intron -    22484847
chr1:111675964(-) A-G intron -    22484847
chr1:111675978(-) A-G intron -    22484847
chr1:111675982(-) A-G intron -    22484847
chr1:111675994(-) A-G intron -    22484847
chr1:111676003(-) A-G intron -    22484847
chr1:111676027(-) A-G intron -    22484847
chr1:111676064(-) A-G intron -    22484847
chr1:111676075(-) A-G intron -    22484847
chr1:111676086(-) A-G intron -    22484847
chr1:111679075(-) A-G intron -    22484847
chr1:111679079(-) G-A intron -    22484847
chr1:111679092(-) A-G intron -    22484847
chr1:111679124(-) A-G intron -    22484847
chr1:111679155(-) A-G intron -    22484847
chr1:111679513(-) A-G intron -    22484847
chr1:111679518(-) A-G intron -    22484847
chr1:111679544(-) A-G intron -    22484847
chr1:111679753(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase DRAM2
chr1:111660495-111660496(-) m6A 3'UTR//exon       24981863//27773535
chr1:111660534-111660535(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr1:111660579-111660580(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr1:111660589-111660590(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr1:111660639-111660640(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr1:111660807-111660808(-) m6A CDS//exon       24981863//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate DRAM2
Chromatin K562 cells     -
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Ribosome-free cytosol Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H5-3p
Interactor2: DRAM2

Evidence Support:


Prediction-Evidence cRep//miRanda//Targetscan
Support Database RepTar//VmiReg

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