Basic Information:

  VIRBase ID:  

VHID00095567

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H5-3p:  MIMAT0008403          SHE:  NM_001010846     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H5-3p	SHE
miRBase Accession/Entrez ID	MIMAT0008403	126669
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SHE	chr1:154449025(-) A-I      intronic chr1:154448713(-) A-I      intronic chr1:154448624(-) A-I      intronic chr1:154448328(-) A-I      intronic chr1:154453930(-) A-I      3'UTR chr1:154446223(-) A-I      intronic chr1:154453933(-) A-I      3'UTR chr1:154470321(-) A-I      intronic chr1:154453958(-) A-I      3'UTR chr1:154453965(-) A-I      3'UTR chr1:154448317(-) A-I      intronic chr1:154446180(-) A-I      intronic chr1:154448290(-) A-I      intronic chr1:154453982(-) A-I      3'UTR chr1:154470362(-) A-I      intronic chr1:154454410(-) A-I      3'UTR chr1:154447909(-) A-I      intronic chr1:154453966(-) A-I      3'UTR chr1:154470328(-) A-I      intronic chr1:154470326(-) A-I      intronic chr1:154456246(-) A-I      3'UTR chr1:154466927(-) A-I      intronic chr1:154446247(-) A-I      intronic chr1:154453975(-) A-I      3'UTR chr1:154447066(-) A-I      intronic chr1:154466909(-) A-I      intronic chr1:154466908(-) A-I      intronic chr1:154446075(-) A-I      intronic chr1:154446074(-) A-I      intronic chr1:154446049(-) A-I      intronic chr1:154446156(-) A-I      intronic chr1:154446044(-) A-I      intronic chr1:154446036(-) A-I      intronic chr1:154446035(-) A-I      intronic chr1:154446034(-) A-I      intronic chr1:154444556(-) A-I      intronic chr1:154443969(-) A-I      intronic chr1:154443968(-) A-I      intronic chr1:154466889(-) A-I      intronic chr1:154453919(-) A-I      3'UTR chr1:154449070(-) A-I      intronic chr1:154448740(-) A-I      intronic chr1:154447105(-) A-I      intronic chr1:154443923(-) A-I      intronic chr1:154445680(-) A-I      intronic chr1:154454666(-) A-I      3'UTR chr1:154454646(-) A-I      3'UTR chr1:154448700(-) A-I      intronic chr1:154467336(-) A-I      intronic chr1:154448605(-) A-I      intronic chr1:154454634(-) A-I      3'UTR chr1:154454669(-) A-I      3'UTR chr1:154454605(-) A-I      3'UTR chr1:154467428(-) A-I      intronic chr1:154448601(-) A-I      intronic chr1:154454595(-) A-I      3'UTR chr1:154448429(-) A-I      intronic chr1:154454566(-) A-I      3'UTR chr1:154448394(-) A-I      intronic chr1:154454557(-) A-I      3'UTR chr1:154448389(-) A-I      intronic chr1:154448384(-) A-I      intronic chr1:154454522(-) A-I      3'UTR chr1:154454469(-) A-I      3'UTR chr1:154454455(-) A-I      3'UTR chr1:154454451(-) A-I      3'UTR chr1:154454402(-) A-I      3'UTR chr1:154454394(-) A-I      3'UTR chr1:154454383(-) A-I      3'UTR chr1:154454373(-) A-I      3'UTR chr1:154454359(-) A-I      3'UTR chr1:154445709(-) A-I      intronic chr1:154443434(-) A-I      intronic chr1:154443425(-) A-I      intronic chr1:154445655(-) A-I      intronic chr1:154448714(-) A-I      intronic chr1:154454667(-) A-I      3'UTR chr1:154448380(-) A-I      intronic chr1:154448375(-) A-I      intronic chr1:154448727(-) A-I      intronic chr1:154448285(-) A-I      intronic chr1:154447895(-) A-I      intronic chr1:154450198(-) A-I      intronic chr1:154450197(-) A-I      intronic chr1:154445647(-) A-I      intronic chr1:154447876(-) A-I      intronic chr1:154467345(-) A-I      intronic chr1:154450187(-) A-I      intronic chr1:154450164(-) A-I      intronic chr1:154450201(-) A-I      intronic chr1:154450219(-) A-I      intronic chr1:154450141(-) A-I      intronic chr1:154449066(-) A-I      intronic chr1:154447856(-) A-I      intronic chr1:154447845(-) A-I      intronic chr1:154447832(-) A-I      intronic chr1:154447823(-) A-I      intronic chr1:154445683(-) A-I      intronic chr1:154445639(-) A-I      intronic chr1:154448739(-) A-I      intronic chr1:154447819(-) A-I      intronic chr1:154450281(-) A-I      intronic chr1:154448916(-) A-I      intronic chr1:154448854(-) A-I      intronic chr1:154450304(-) A-I      intronic chr1:154450310(-) A-I      intronic chr1:154448997(-) A-I      intronic chr1:154448984(-) A-I      intronic chr1:154448956(-) A-I      intronic chr1:154450314(-) A-I      intronic chr1:154448939(-) A-I      intronic chr1:154447801(-) A-I      intronic chr1:154448878(-) A-I      intronic chr1:154447800(-) A-I      intronic chr1:154443090(-) A-I      intronic chr1:154443098(-) A-I      intronic chr1:154447791(-) A-I      intronic chr1:154450315(-) A-I      intronic chr1:154447787(-) A-I      intronic chr1:154443099(-) A-I      intronic chr1:154447774(-) A-I      intronic chr1:154443104(-) A-I      intronic chr1:154447760(-) A-I      intronic chr1:154443400(-) A-I      intronic chr1:154443209(-) A-I      intronic chr1:154445634(-) A-I      intronic chr1:154443234(-) A-I      intronic chr1:154447735(-) A-I      intronic chr1:154447730(-) A-I      intronic chr1:154447218(-) A-I      intronic chr1:154447180(-) A-I      intronic chr1:154443424(-) A-I      intronic chr1:154443965(-) A-I      intronic chr1:154443240(-) A-I      intronic chr1:154456233(-) A-I      3'UTR chr1:154447174(-) A-I      intronic chr1:154443374(-) A-I      intronic chr1:154443377(-) A-I      intronic chr1:154443386(-) A-I      intronic chr1:154454771(-) A-I      3'UTR chr1:154447169(-) A-I      intronic chr1:154445572(-) A-I      intronic chr1:154443403(-) A-I      intronic chr1:154445586(-) A-I      intronic chr1:154450320(-) A-I      intronic chr1:154454756(-) A-I      3'UTR chr1:154456250(-) A-I      3'UTR chr1:154445607(-) A-I      intronic chr1:154447150(-) A-I      intronic chr1:154456251(-) A-I      3'UTR chr1:154447118(-) A-I      intronic chr1:154456265(-) A-I      3'UTR chr1:154450329(-) A-I      intronic chr1:154460093(-) A-I      intronic chr1:154454740(-) A-I      3'UTR chr1:154447102(-) A-I      intronic chr1:154454727(-) A-I      3'UTR chr1:154456276(-) A-I      3'UTR chr1:154456350(-) A-I      3'UTR chr1:154445612(-) A-I      intronic chr1:154447077(-) A-I      intronic chr1:154443423(-) A-I      intronic chr1:154446142(-) A-I      intronic chr1:154456388(-) A-I      3'UTR chr1:154454717(-) A-I      3'UTR chr1:154445560(-) A-I      intronic chr1:154456411(-) A-I      3'UTR chr1:154456441(-) A-I      3'UTR chr1:154456448(-) A-I      3'UTR chr1:154445542(-) A-I      intronic chr1:154460098(-) A-I      intronic chr1:154454694(-) A-I      3'UTR chr1:154456470(-) A-I      3'UTR chr1:154456238(-) A-I      3'UTR chr1:154446136(-) A-I      intronic chr1:154444586(-) A-I      intronic chr1:154446122(-) A-I      intronic chr1:154461130(-) A-I      intronic chr1:154446107(-) A-I      intronic chr1:154446085(-) A-I      intronic chr1:154446057(-) A-I      intronic chr1:154445851(-) A-I      intronic chr1:154444573(-) A-I      intronic chr1:154444457(-) A-I      intronic chr1:154454693(-) A-I      3'UTR chr1:154454685(-) A-I      3'UTR chr1:154444432(-) A-I      intronic chr1:154454684(-) A-I      3'UTR chr1:154444431(-) A-I      intronic chr1:154444028(-) A-I      intronic chr1:154445755(-) A-I      intronic chr1:154445722(-) A-I      intronic chr1:154467323(-) A-I      intronic chr1:154443993(-) A-I      intronic chr1:154449933(-) A-I      intronic chr1:154447942(-) A-I      intronic chr1:154447882(-) A-I      intronic chr1:154448650(-) A-I      intronic chr1:154445708(-) A-I      intronic chr1:154443929(-) A-I      intronic chr1:154443133(-) A-I      intronic chr1:154448411(-) A-I      intronic chr1:154447021(-) A-I      intronic chr1:154448765(-) A-I      intronic chr1:154445395(-) A-I      intronic chr1:154443065(-) A-I      intronic chr1:154446058(-) A-I      intronic chr1:154443987(-) A-I      intronic chr1:154448405(-) A-I      intronic chr1:154443233(-) A-I      intronic chr1:154445381(-) A-I      intronic chr1:154456391(-) A-I      3'UTR chr1:154447900(-) A-I      intronic chr1:154449931(-) A-I      intronic chr1:154445471(-) A-I      intronic chr1:154445868(-) A-I      intronic chr1:154454654(-) A-I      3'UTR chr1:154454552(-) A-I      3'UTR chr1:154448979(-) A-I      intronic chr1:154445393(-) A-I      intronic chr1:154448721(-) A-I      intronic chr1:154450255(-) A-I      intronic chr1:154445613(-) A-I      intronic chr1:154443939(-) A-I      intronic chr1:154454398(-) A-I      3'UTR chr1:154446022(-) A-I      intronic chr1:154454763(-) A-I      3'UTR chr1:154445907(-) A-I      intronic chr1:154445869(-) A-I      intronic chr1:154447109(-) A-I      intronic chr1:154449954(-) A-I      intronic chr1:154444009(-) A-I      intronic chr1:154456466(-) A-I      3'UTR chr1:154446265(-) A-I      intronic chr1:154454587(-) A-I      3'UTR chr1:154456467(-) A-I      3'UTR chr1:154448736(-) A-I      intronic chr1:154443310(-) A-I      intronic chr1:154454628(-) A-I      3'UTR chr1:154454683(-) A-I      3'UTR chr1:154454592(-) A-I      3'UTR chr1:154447051(-) A-I      intronic chr1:154449094(-) A-I      intronic chr1:154446698(-) A-I      intronic chr1:154461319(-) A-I      intronic chr1:154450162(-) A-I      intronic chr1:154445669(-) A-I      intronic chr1:154448864(-) A-I      intronic chr1:154454708(-) A-I      3'UTR chr1:154449898(-) A-I      intronic chr1:154446016(-) A-I      intronic chr1:154454434(-) A-I      3'UTR chr1:154456366(-) A-I      3'UTR chr1:154446228(-) A-I      intronic chr1:154454736(-) A-I      3'UTR chr1:154448876(-) A-I      intronic chr1:154443911(-) A-I      intronic chr1:154460899(-) A-I      intronic chr1:154447827(-) A-I      intronic chr1:154450122(-) A-I      intronic chr1:154446158(-) A-I      intronic chr1:154449963(-) A-I      intronic chr1:154454722(-) A-I      3'UTR chr1:154448578(-) A-I      intronic chr1:154454658(-) A-I      3'UTR chr1:154454732(-) A-I      3'UTR chr1:154444567(-) A-I      intronic chr1:154460322(-) A-I      intronic chr1:154448775(-) A-I      intronic chr1:154447930(-) A-I      intronic chr1:154449100(-) A-I      intronic chr1:154449876(-) A-I      intronic chr1:154444041(-) A-I      intronic chr1:154445915(-) A-I      intronic chr1:154456256(-) A-I      3'UTR chr1:154460536(-) A-I      intronic chr1:154454703(-) A-I      3'UTR chr1:154460512(-) A-I      intronic chr1:154448571(-) A-I      intronic chr1:154445679(-) A-I      intronic chr1:154460931(-) A-I      intronic chr1:154448649(-) A-I      intronic chr1:154454378(-) A-I      3'UTR chr1:154445870(-) A-I      intronic chr1:154456428(-) A-I      3'UTR chr1:154450229(-) A-I      intronic chr1:154447936(-) A-I      intronic chr1:154459585(-) A-I      intronic chr1:154454730(-) A-I      3'UTR chr1:154447866(-) A-I      intronic chr1:154447864(-) A-I      intronic chr1:154448759(-) A-I      intronic chr1:154448819(-) A-I      intronic chr1:154444004(-) A-I      intronic chr1:154454672(-) A-I      3'UTR chr1:154446113(-) A-I      intronic chr1:154449928(-) A-I      intronic chr1:154456352(-) A-I      3'UTR chr1:154461006(-) A-I      intronic chr1:154456264(-) A-I      3'UTR chr1:154449102(-) A-I      intronic chr1:154445646(-) A-I      intronic chr1:154456326(-) A-I      3'UTR chr1:154448577(-) A-I      intronic chr1:154456211(-) A-I      3'UTR chr1:154446087(-) A-I      intronic chr1:154443086(-) A-I      intronic chr1:154446096(-) A-I      intronic chr1:154456263(-) A-I      3'UTR chr1:154449062(-) A-I      intronic chr1:154447096(-) A-I      intronic chr1:154456427(-) A-I      3'UTR chr1:154449919(-) A-I      intronic chr1:154446019(-) A-I      intronic chr1:154445748(-) A-I      intronic chr1:154447200(-) A-I      intronic chr1:154449019(-) A-I      intronic chr1:154454361(-) A-I      3'UTR chr1:154449971(-) A-I      intronic chr1:154448630(-) A-I      intronic chr1:154445882(-) A-I      intronic chr1:154454386(-) A-I      3'UTR chr1:154446171(-) A-I      intronic chr1:154454757(-) A-I      3'UTR chr1:154448927(-) A-I      intronic chr1:154445749(-) A-I      intronic chr1:154445446(-) A-I      intronic chr1:154460249(-) A-I      intronic chr1:154445904(-) A-I      intronic chr1:154448306(-) A-I      intronic chr1:154445420(-) A-I      intronic chr1:154449045(-) A-I      intronic chr1:154450175(-) A-I      intronic chr1:154449977(-) A-I      intronic chr1:154450145(-) A-I      intronic chr1:154460324(-) A-I      intronic chr1:154456417(-) A-I      3'UTR chr1:154454663(-) A-I      3'UTR chr1:154450245(-) A-I      intronic chr1:154446204(-) A-I      intronic chr1:154445649(-) A-I      intronic chr1:154460532(-) A-I      intronic chr1:154445421(-) A-I      intronic chr1:154445843(-) A-I      intronic chr1:154448637(-) A-I      intronic chr1:154447725(-) A-I      intronic chr1:154446062(-) A-I      intronic chr1:154443774(-) A-I      intronic chr1:154448287(-) A-I      intronic chr1:154448574(-) A-I      intronic chr1:154456242(-) A-I      3'UTR chr1:154448877(-) A-I      intronic chr1:154459582(-) A-I      intronic chr1:154454409(-) A-I      3'UTR chr1:154445713(-) A-I      intronic chr1:154448858(-) A-I      intronic chr1:154444006(-) A-I      intronic chr1:154447731(-) A-I      intronic chr1:154448427(-) A-I      intronic chr1:154446164(-) A-I      intronic chr1:154447935(-) A-I      intronic chr1:154445823(-) A-I      intronic chr1:154447250(-) A-I      intronic chr1:154454582(-) A-I      3'UTR chr1:154448682(-) A-I      intronic chr1:154443824(-) A-I      intronic chr1:154456305(-) A-I      3'UTR chr1:154456365(-) A-I      3'UTR chr1:154448410(-) A-I      intronic chr1:154459505(-) A-I      intronic chr1:154454668(-) A-I      3'UTR chr1:154456249(-) A-I      3'UTR chr1:154454657(-) A-I      3'UTR chr1:154446061(-) A-I      intronic chr1:154464805(-) A-I      intronic chr1:154449061(-) A-I      intronic chr1:154446132(-) A-I      intronic chr1:154446246(-) A-I      intronic chr1:154449976(-) A-I      intronic chr1:154445829(-) A-I      intronic chr1:154454762(-) A-I      3'UTR chr1:154449900(-) A-I      intronic chr1:154446185(-) A-I      intronic chr1:154459560(-) A-I      intronic chr1:154446168(-) A-I      intronic chr1:154448953(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	SHE	chr1:154454552(-) A-I exon 3'UTR    15258596 chr1:154454703(-) A-I exon 3'UTR    15258596 chr1:154454708(-) A-I exon 3'UTR    15258596 chr1:154454398(-) A-G exon 3'UTR    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SHE	chr1:154455887-154455888(-) m6A 3'UTR//intron       27773535 chr1:154455910-154455911(-) m6A 3'UTR//intron       27773535 chr1:154455956-154455957(-) m6A 3'UTR//intron       27773535 chr1:154456354-154456355(-) m6A 3'UTR//intron       - chr1:154456539-154456540(-) m6A 3'UTR//intron       - chr1:154456549-154456550(-) m6A 3'UTR//intron       27773535 chr1:154456666-154456667(-) m6A 3'UTR//CDS//intron       27773535 chr1:154456743-154456744(-) m6A 3'UTR//CDS//intron       27773535 chr1:154456766-154456767(-) m6A 3'UTR//CDS//intron       27773535 chr1:154456773-154456774(-) m6A 3'UTR//CDS//intron       27773535 chr1:154459084-154459085(-) m6A CDS       - chr1:154459117-154459118(-) m6A CDS       - chr1:154461618-154461619(-) m6A CDS       - chr1:154461708-154461709(-) m6A CDS       - chr1:154461736-154461737(-) m6A CDS       - chr1:154461764-154461765(-) m6A CDS       - chr1:154471615-154471616(-) m6A CDS       27773535 chr1:154471668-154471669(-) m6A CDS       27773535 chr1:154471697-154471698(-) m6A CDS       27773535 chr1:154473942-154473943(-) m6A CDS       27773535 chr1:154474050-154474051(-) m6A CDS       - chr1:154474137-154474138(-) m6A CDS       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SHE	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H5-3p
Interactor2: SHE

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Targetscan
Support Database	RepTar//VmiReg