Detail Information

Basic Information:


  VIRBase ID:  

VHID00095534

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H5-3p:           C16orf46:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H5-3p C16orf46
miRBase
Accession/Entrez ID		 MIMAT0008403 123775
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR C16orf46
chr16:81088196(-) A-I      intronic
chr16:81088213(-) A-I      intronic
chr16:81088219(-) A-I      intronic
chr16:81088363(-) A-I      intronic
chr16:81088378(-) A-I      intronic
chr16:81088420(-) A-I      intronic
chr16:81088422(-) A-I      intronic
chr16:81088431(-) A-I      intronic
chr16:81088432(-) A-I      intronic
chr16:81088435(-) A-I      intronic
chr16:81088447(-) A-I      intronic
chr16:81088456(-) A-I      intronic
chr16:81088471(-) A-I      intronic
chr16:81089231(-) A-I      intronic
chr16:81089432(-) A-I      intronic
chr16:81089461(-) A-I      intronic
chr16:81091072(-) A-I      intronic
chr16:81092869(-) A-I      intronic
chr16:81091393(-) A-I      intronic
chr16:81103583(-) A-I      intronic
chr16:81103587(-) A-I      intronic
chr16:81091097(-) A-I      intronic
chr16:81090157(-) A-I      intronic
chr16:81090096(-) A-I      intronic
chr16:81090089(-) A-I      intronic
chr16:81090066(-) A-I      intronic
chr16:81090056(-) A-I      intronic
chr16:81089596(-) A-I      intronic
chr16:81089579(-) A-I      intronic
chr16:81089292(-) A-I      intronic
chr16:81089249(-) A-I      intronic
chr16:81089199(-) A-I      intronic
chr16:81089036(-) A-I      intronic
chr16:81088548(-) A-I      intronic
chr16:81088517(-) A-I      intronic
chr16:81088466(-) A-I      intronic
chr16:81088457(-) A-I      intronic
chr16:81088446(-) A-I      intronic
chr16:81088391(-) A-I      intronic
chr16:81088269(-) A-I      intronic
chr16:81090909(-) A-I      intronic
chr16:81090951(-) A-I      intronic
chr16:81090974(-) A-I      intronic
chr16:81090997(-) A-I      intronic
chr16:81091005(-) A-I      intronic
chr16:81091010(-) A-I      intronic
chr16:81091090(-) A-I      intronic
chr16:81091553(-) A-I      intronic
chr16:81091596(-) A-I      intronic
chr16:81091609(-) A-I      intronic
chr16:81091632(-) A-I      intronic
chr16:81092695(-) A-I      intronic
chr16:81092697(-) A-I      intronic
chr16:81092698(-) A-I      intronic
chr16:81092732(-) A-I      intronic
chr16:81092786(-) A-I      intronic
chr16:81092802(-) A-I      intronic
chr16:81092826(-) A-I      intronic
chr16:81092882(-) A-I      intronic
chr16:81092892(-) A-I      intronic
chr16:81092904(-) A-I      intronic
chr16:81093466(-) A-I      intronic
chr16:81093486(-) A-I      intronic
chr16:81093491(-) A-I      intronic
chr16:81093499(-) A-I      intronic
chr16:81093500(-) A-I      intronic
chr16:81093518(-) A-I      intronic
chr16:81093568(-) A-I      intronic
chr16:81093627(-) A-I      intronic
chr16:81093916(-) A-I      intronic
chr16:81094029(-) A-I      intronic
chr16:81097797(-) A-I      intronic
chr16:81097809(-) A-I      intronic
chr16:81097823(-) A-I      intronic
chr16:81100105(-) A-I      intronic
chr16:81101218(-) A-I      intronic
chr16:81102489(-) A-I      intronic
chr16:81108114(-) A-I      intronic
chr16:81108122(-) A-I      intronic
chr16:81108128(-) A-I      intronic
chr16:81089056(-) A-I      intronic
chr16:81091588(-) A-I      intronic
chr16:81099628(-) A-I      intronic
chr16:81091589(-) A-I      intronic
chr16:81088493(-) A-I      intronic
chr16:81103548(-) A-I      intronic
chr16:81103647(-) A-I      intronic
chr16:81093451(-) A-I      intronic
chr16:81091142(-) A-I      intronic
chr16:81097935(-) A-I      intronic
chr16:81092690(-) A-I      intronic
chr16:81094035(-) A-I      intronic
chr16:81091511(-) A-I      intronic
chr16:81090950(-) A-I      intronic
chr16:81089284(-) A-I      intronic
chr16:81103486(-) A-I      intronic
chr16:81091101(-) A-I      intronic
chr16:81089463(-) A-I      intronic
chr16:81094097(-) A-I      intronic
chr16:81089204(-) A-I      intronic
chr16:81103562(-) A-I      intronic
chr16:81093565(-) A-I      intronic
chr16:81090957(-) A-I      intronic
chr16:81101390(-) A-I      intronic
chr16:81091042(-) A-I      intronic
chr16:81092763(-) A-I      intronic
chr16:81109173(-) A-I      intronic
chr16:81091380(-) A-I      intronic
chr16:81091071(-) A-I      intronic
chr16:81103644(-) A-I      intronic
chr16:81089077(-) A-I      intronic
chr16:81091465(-) A-I      intronic
chr16:81091068(-) A-I      intronic
chr16:81093561(-) A-I      intronic
chr16:81088480(-) A-I      intronic
chr16:81089328(-) A-I      intronic
chr16:81088448(-) A-I      intronic
chr16:81099002(-) A-I      intronic
chr16:81093986(-) A-I      intronic
chr16:81108254(-) A-I      intronic
chr16:81089187(-) A-I      intronic
chr16:81094094(-) A-I      intronic
chr16:81089169(-) A-I      intronic
chr16:81088268(-) A-I      intronic
chr16:81108261(-) A-I      intronic
chr16:81091608(-) A-I      intronic
chr16:81089451(-) A-I      intronic
chr16:81091523(-) A-I      intronic
chr16:81093666(-) A-I      intronic
chr16:81094038(-) A-I      intronic
chr16:81089190(-) A-I      intronic
chr16:81089242(-) A-I      intronic
chr16:81094081(-) A-I      intronic
chr16:81106538(-) A-I      intronic
chr16:81089055(-) A-I      intronic
chr16:81092766(-) A-I      intronic
chr16:81089414(-) A-I      intronic
chr16:81101220(-) A-I      intronic
chr16:81089536(-) A-I      intronic
chr16:81092804(-) A-I      intronic
chr16:81090121(-) A-I      intronic
chr16:81091138(-) A-I      intronic
chr16:81089175(-) A-I      intronic
chr16:81091469(-) A-I      intronic
chr16:81092693(-) A-I      intronic
chr16:81105108(-) A-I      intronic
chr16:81091091(-) A-I      intronic
chr16:81101414(-) A-I      intronic
chr16:81088426(-) A-I      intronic
chr16:81101309(-) A-I      intronic
chr16:81089255(-) A-I      intronic
chr16:81088421(-) A-I      intronic
chr16:81108086(-) A-I      intronic
chr16:81089247(-) A-I      intronic
chr16:81091447(-) A-I      intronic
chr16:81092707(-) A-I      intronic
chr16:81088316(-) A-I      intronic
chr16:81091455(-) A-I      intronic
chr16:81104322(-) A-I      intronic
chr16:81092818(-) A-I      intronic
chr16:81099505(-) A-I      intronic
chr16:81089224(-) A-I      intronic
chr16:81089410(-) A-I      intronic
chr16:81091552(-) A-I      intronic
chr16:81089216(-) A-I      intronic
chr16:81088178(-) A-I      intronic
chr16:81088225(-) A-I      intronic
chr16:81105134(-) A-I      intronic
chr16:81088350(-) A-I      intronic
chr16:81089094(-) A-I      intronic
chr16:81094019(-) A-I      intronic
chr16:81088235(-) A-I      intronic
chr16:81088417(-) A-I      intronic
chr16:81109028(-) A-I      intronic
chr16:81103473(-) A-I      intronic
chr16:81099440(-) A-I      intronic
chr16:81106403(-) A-I      intronic
chr16:81094010(-) A-I      intronic
chr16:81088509(-) A-I      intronic
chr16:81089518(-) A-I      intronic
chr16:81108098(-) A-I      intronic
chr16:81091487(-) A-I      intronic
chr16:81091491(-) A-I      intronic
chr16:81088173(-) A-I      intronic
chr16:81090050(-) A-I      intronic
chr16:81089437(-) A-I      intronic
chr16:81089422(-) A-I      intronic
chr16:81088362(-) A-I      intronic
chr16:81092879(-) A-I      intronic
chr16:81089054(-) A-I      intronic
chr16:81090897(-) A-I      intronic
chr16:81091486(-) A-I      intronic
chr16:81108087(-) A-I      intronic
chr16:81108938(-) A-I      intronic
chr16:81088449(-) A-I      intronic
chr16:81099629(-) A-I      intronic
chr16:81094078(-) A-I      intronic
chr16:81100109(-) A-I      intronic
chr16:81091572(-) A-I      intronic
chr16:81089460(-) A-I      intronic
chr16:81093532(-) A-I      intronic
chr16:81089040(-) A-I      intronic
chr16:81102584(-) A-I      intronic
chr16:81091472(-) A-I      intronic
chr16:81089595(-) A-I      intronic
chr16:81100093(-) A-I      intronic
chr16:81091102(-) A-I      intronic
chr16:81093562(-) A-I      intronic
chr16:81109073(-) A-I      intronic
chr16:81088292(-) A-I      intronic
chr16:81092844(-) A-I      intronic
chr16:81091392(-) A-I      intronic
chr16:81088382(-) A-I      intronic
chr16:81088485(-) A-I      intronic
chr16:81092843(-) A-I      intronic
chr16:81093558(-) A-I      intronic
chr16:81101385(-) A-I      intronic
chr16:81099513(-) A-I      intronic
chr16:81089177(-) A-I      intronic
chr16:81093441(-) A-I      intronic
chr16:81100041(-) A-I      intronic
chr16:81091032(-) A-I      intronic
chr16:81088392(-) A-I      intronic
chr16:81089487(-) A-I      intronic
chr16:81088386(-) A-I      intronic
chr16:81104389(-) A-I      intronic
chr16:81088351(-) A-I      intronic
chr16:81092692(-) A-I      intronic
chr16:81089081(-) A-I      intronic
chr16:81092895(-) A-I      intronic
chr16:81089296(-) A-I      intronic
chr16:81091634(-) A-I      intronic
chr16:81109087(-) A-I      intronic
chr16:81100083(-) A-I      intronic
chr16:81099623(-) A-I      intronic
chr16:81109010(-) A-I      intronic
chr16:81099596(-) A-I      intronic
chr16:81094003(-) A-I      intronic
chr16:81093999(-) A-I      intronic
chr16:81094086(-) A-I      intronic
chr16:81109148(-) A-I      intronic
chr16:81090424(-) A-I      intronic
chr16:81099602(-) A-I      intronic
chr16:81091094(-) A-I      intronic
chr16:81088532(-) A-I      intronic
chr16:81088330(-) A-I      intronic
chr16:81098093(-) A-I      intronic
chr16:81088197(-) A-I      intronic
chr16:81089237(-) A-I      intronic
chr16:81091019(-) A-I      intronic
chr16:81090991(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED C16orf46
chr16:81088173(-) A-I intron -    15342557
chr16:81088316(-) A-I intron -    15342557
chr16:81088330(-) A-I intron -    15342557
chr16:81088362(-) A-I intron -    15342557
chr16:81088386(-) A-I intron -    15342557
chr16:81088448(-) A-I intron -    15342557
chr16:81088449(-) A-I intron -    15342557
chr16:81088480(-) A-I intron -    15342557
chr16:81088485(-) A-I intron -    15342557
chr16:81088532(-) A-I intron -    15342557
chr16:81089040(-) A-I intron -    15342557
chr16:81089647(-) A-I intron -    15342557
chr16:81109028(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase C16orf46
chr16:81087595-81087596(-) m6A 3'UTR       24981863//27773535//22608085
chr16:81094594-81094595(-) m6A 3'UTR//intron       27773535
chr16:81094750-81094751(-) m6A 3'UTR//intron       27773535
chr16:81094831-81094832(-) m6A CDS       27773535//22608085
chr16:81094848-81094849(-) m6A CDS       27773535//22608085
chr16:81094868-81094869(-) m6A CDS       27773535//22608085
chr16:81095012-81095013(-) m6A CDS       24284625//27773535
chr16:81095030-81095031(-) m6A CDS       24284625//27773535//27371828
chr16:81095140-81095141(-) m6A CDS       24284625//24981863//27773535//27371828//22608085
chr16:81095184-81095185(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22608085
chr16:81095261-81095262(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22608085
chr16:81095432-81095433(-) m6A CDS//exon       24284625//24209618//24981863//27773535//22608085
chr16:81095556-81095557(-) m6A CDS//exon       24284625//24209618//24981863//27773535//22608085
chr16:81095610-81095611(-) m6A CDS//exon       24284625//24209618//24981863//22608085
chr16:81095724-81095725(-) m6A CDS//exon       27773535//27371828
chr16:81097367-81097368(-) m6A CDS//intron       27773535//27371828
chr16:81097401-81097402(-) m6A CDS//intron       27773535
chr16:81097482-81097483(-) m6A CDS//intron       27773535
chr16:81097487-81097488(-) m6A CDS//intron       27773535
chr16:81097535-81097536(-) m6A CDS//intron       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate C16orf46
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H5-3p
Interactor2: C16orf46

Evidence Support:


Prediction-Evidence cRep//miRanda//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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