Basic Information:

  VIRBase ID:  

VHID00095532

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H5-3p:  MIMAT0008403          SLC25A29:  NM_001352821     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H5-3p	SLC25A29
miRBase Accession/Entrez ID	MIMAT0008403	123096
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C14orf69//CACL//ORNT3

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SLC25A29	chr14:100767676(-) A-I      intronic chr14:100767678(-) A-I      intronic chr14:100767696(-) A-I      intronic chr14:100767697(-) A-I      intronic chr14:100767698(-) A-I      intronic chr14:100767707(-) A-I      intronic chr14:100768577(-) A-I      intronic chr14:100768578(-) A-I      intronic chr14:100768876(-) A-I      intronic chr14:100768929(-) A-I      intronic chr14:100766526(-) A-I      intronic chr14:100766896(-) A-I      intronic chr14:100767405(-) A-I      intronic chr14:100768773(-) A-I      intronic chr14:100760327(-) A-I      intronic chr14:100760334(-) A-I      intronic chr14:100760337(-) A-I      intronic chr14:100760363(-) A-I      intronic chr14:100760366(-) A-I      intronic chr14:100762638(-) A-I      intronic chr14:100766889(-) A-I      intronic chr14:100767406(-) A-I      intronic chr14:100762647(-) A-I      intronic chr14:100760435(-) A-I      intronic chr14:100766836(-) A-I      intronic chr14:100760367(-) A-I      intronic chr14:100760213(-) A-I      intronic chr14:100766522(-) A-I      intronic chr14:100766480(-) A-I      intronic chr14:100768845(-) A-I      intronic chr14:100766796(-) A-I      intronic chr14:100766459(-) A-I      intronic chr14:100762594(-) A-I      intronic chr14:100766513(-) A-I      intronic chr14:100766551(-) A-I      intronic chr14:100766809(-) A-I      intronic chr14:100766486(-) A-I      intronic chr14:100766521(-) A-I      intronic chr14:100766812(-) A-I      intronic chr14:100762558(-) A-I      intronic chr14:100766442(-) A-I      intronic chr14:100762968(-) A-I      intronic chr14:100763008(-) A-I      intronic chr14:100762684(-) A-I      intronic chr14:100762648(-) A-I      intronic chr14:100763074(-) A-I      intronic chr14:100766787(-) A-I      intronic chr14:100763119(-) A-I      intronic chr14:100768764(-) A-I      intronic chr14:100768825(-) A-I      intronic chr14:100763068(-) A-I      intronic chr14:100767671(-) A-I      intronic chr14:100767704(-) A-I      intronic chr14:100768835(-) A-I      intronic chr14:100766913(-) A-I      intronic chr14:100768043(-) A-I      intronic chr14:100768126(-) A-I      intronic chr14:100766403(-) A-I      intronic chr14:100768547(-) A-I      intronic chr14:100767401(-) A-I      intronic chr14:100766567(-) A-I      intronic chr14:100763191(-) A-I      intronic chr14:100768011(-) A-I      intronic chr14:100767509(-) A-I      intronic chr14:100766792(-) A-I      intronic chr14:100767774(-) A-I      intronic chr14:100763104(-) A-I      intronic chr14:100763051(-) A-I      intronic chr14:100768872(-) A-I      intronic chr14:100762720(-) A-I      intronic chr14:100763044(-) A-I      intronic chr14:100763155(-) A-I      intronic chr14:100767411(-) A-I      intronic chr14:100763041(-) A-I      intronic chr14:100763025(-) A-I      intronic chr14:100767304(-) A-I      intronic chr14:100768015(-) A-I      intronic chr14:100763001(-) A-I      intronic chr14:100763224(-) A-I      intronic chr14:100768586(-) A-I      intronic chr14:100762948(-) A-I      intronic chr14:100762733(-) A-I      intronic chr14:100763308(-) A-I      intronic chr14:100766349(-) A-I      intronic chr14:100766460(-) A-I      intronic chr14:100766468(-) A-I      intronic chr14:100766473(-) A-I      intronic chr14:100766888(-) A-I      intronic chr14:100766890(-) A-I      intronic chr14:100767297(-) A-I      intronic chr14:100767348(-) A-I      intronic chr14:100767365(-) A-I      intronic chr14:100767369(-) A-I      intronic chr14:100767375(-) A-I      intronic chr14:100767417(-) A-I      intronic chr14:100767471(-) A-I      intronic chr14:100767503(-) A-I      intronic chr14:100767672(-) A-I      intronic chr14:100768018(-) A-I      intronic chr14:100768052(-) A-I      intronic chr14:100768076(-) A-I      intronic chr14:100768111(-) A-I      intronic chr14:100768528(-) A-I      intronic chr14:100768550(-) A-I      intronic chr14:100768552(-) A-I      intronic chr14:100768553(-) A-I      intronic chr14:100768584(-) A-I      intronic chr14:100768601(-) A-I      intronic chr14:100768602(-) A-I      intronic chr14:100767667(-) A-I      intronic chr14:100763406(-) A-I      intronic chr14:100766365(-) A-I      intronic chr14:100766831(-) A-I      intronic chr14:100762938(-) A-I      intronic chr14:100767670(-) A-I      intronic chr14:100768663(-) A-I      intronic chr14:100763304(-) A-I      intronic chr14:100763332(-) A-I      intronic chr14:100766545(-) A-I      intronic chr14:100768920(-) A-I      intronic chr14:100766603(-) A-I      intronic chr14:100763229(-) A-I      intronic chr14:100763199(-) A-I      intronic chr14:100763331(-) A-I      intronic chr14:100763047(-) A-I      intronic chr14:100768861(-) A-I      intronic chr14:100762728(-) A-I      intronic chr14:100762910(-) A-I      intronic chr14:100766333(-) A-I      intronic chr14:100768808(-) A-I      intronic chr14:100766570(-) A-I      intronic chr14:100762657(-) A-I      intronic chr14:100768918(-) A-I      intronic chr14:100762744(-) A-I      intronic chr14:100763106(-) A-I      intronic chr14:100768520(-) A-I      intronic chr14:100767441(-) A-I      intronic chr14:100763382(-) A-I      intronic chr14:100763064(-) A-I      intronic chr14:100763825(-) A-I      intronic chr14:100760354(-) A-I      intronic chr14:100766953(-) A-I      intronic chr14:100767599(-) A-I      intronic chr14:100768119(-) A-I      intronic chr14:100766893(-) A-I      intronic chr14:100763361(-) A-I      intronic chr14:100763156(-) A-I      intronic chr14:100767706(-) A-I      intronic chr14:100763362(-) A-I      intronic chr14:100763387(-) A-I      intronic chr14:100762690(-) A-I      intronic chr14:100768841(-) A-I      intronic chr14:100767291(-) A-I      intronic chr14:100767775(-) A-I      intronic chr14:100766363(-) A-I      intronic chr14:100768700(-) A-I      intronic chr14:100766445(-) A-I      intronic chr14:100766351(-) A-I      intronic chr14:100763012(-) A-I      intronic chr14:100767485(-) A-I      intronic chr14:100762649(-) A-I      intronic chr14:100762719(-) A-I      intronic chr14:100767627(-) A-I      intronic chr14:100766914(-) A-I      intronic chr14:100768860(-) A-I      intronic chr14:100762644(-) A-I      intronic chr14:100768769(-) A-I      intronic chr14:100768556(-) A-I      intronic chr14:100766835(-) A-I      intronic chr14:100760253(-) A-I      intronic chr14:100763310(-) A-I      intronic chr14:100762597(-) A-I      intronic chr14:100762658(-) A-I      intronic chr14:100768921(-) A-I      intronic chr14:100768971(-) A-I      intronic chr14:100766788(-) A-I      intronic chr14:100763442(-) A-I      intronic chr14:100763422(-) A-I      intronic chr14:100760274(-) A-I      intronic chr14:100768629(-) A-I      intronic chr14:100762739(-) A-I      intronic chr14:100768014(-) A-I      intronic chr14:100768551(-) A-I      intronic chr14:100767682(-) A-I      intronic chr14:100768041(-) A-I      intronic chr14:100766451(-) A-I      intronic chr14:100762654(-) A-I      intronic chr14:100766428(-) A-I      intronic chr14:100762919(-) A-I      intronic chr14:100768867(-) A-I      intronic chr14:100763208(-) A-I      intronic chr14:100760362(-) A-I      intronic chr14:100768829(-) A-I      intronic chr14:100768521(-) A-I      intronic chr14:100768016(-) A-I      intronic chr14:100762988(-) A-I      intronic chr14:100766525(-) A-I      intronic chr14:100762716(-) A-I      intronic chr14:100763105(-) A-I      intronic chr14:100767618(-) A-I      intronic chr14:100766508(-) A-I      intronic chr14:100763140(-) A-I      intronic chr14:100763207(-) A-I      intronic chr14:100766898(-) A-I      intronic chr14:100768026(-) A-I      intronic chr14:100767958(-) A-I      intronic chr14:100768964(-) A-I      intronic chr14:100766996(-) A-I      intronic chr14:100763004(-) A-I      intronic chr14:100766364(-) A-I      intronic chr14:100767508(-) A-I      intronic chr14:100768579(-) A-I      intronic chr14:100766496(-) A-I      intronic chr14:100762671(-) A-I      intronic chr14:100768873(-) A-I      intronic chr14:100768454(-) A-I      intronic chr14:100763003(-) A-I      intronic chr14:100766884(-) A-I      intronic chr14:100763381(-) A-I      intronic chr14:100767721(-) A-I      intronic chr14:100762714(-) A-I      intronic chr14:100768655(-) A-I      intronic chr14:100766887(-) A-I      intronic chr14:100766378(-) A-I      intronic chr14:100762974(-) A-I      intronic chr14:100762504(-) A-I      intronic chr14:100762764(-) A-I      intronic chr14:100766897(-) A-I      intronic chr14:100766556(-) A-I      intronic chr14:100762973(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	SLC25A29	chr14:100762973(-) A-I intron -    15342557 chr14:100763003(-) A-I intron -    15342557   //21960545 chr14:100763004(-) A-I intron -    15342557 chr14:100763012(-) A-I intron -    15342557 chr14:100763047(-) A-I intron -    15342557 chr14:100763064(-) A-I intron -    15342557 chr14:100763074(-) A-I intron -    15342557 chr14:100763156(-) A-I intron -    15342557 chr14:100763406(-) A-I intron -    15342557 chr14:100768764(-) A-I intron -    15342557 chr14:100768769(-) A-I intron -    15342557 chr14:100768808(-) A-I intron -    15342557 chr14:100768825(-) A-I intron -    15342557 chr14:100768829(-) A-I intron -    15342557 chr14:100768835(-) A-I intron -    15342557 chr14:100768841(-) A-I intron -    15342557 chr14:100768845(-) A-I intron -    15342557 chr14:100768860(-) A-I intron -    15342557 chr14:100768867(-) A-I intron -    15342557   //15258596 chr14:100768872(-) A-I intron -    15342557   //15258596 chr14:100768873(-) A-I intron -    15342557   //15258596 chr14:100768920(-) A-I intron -    15342557   //15258596 chr14:100768921(-) A-I intron -    15342557   //15258596 chr14:100768971(-) A-I intron -    15342557   //15258596 chr14:100771483(-) A-I intron -    15342557 chr14:100762690(-) A-I intron -    21960545   //22327324 chr14:100762714(-) A-I intron -    21960545   //22327324 chr14:100763361(-) A-I intron -    21960545   //22327324 chr14:100766378(-) A-I intron -    22028664 chr14:100766428(-) A-I intron -    22028664 chr14:100766442(-) A-I intron -    22028664 chr14:100766445(-) A-I intron -    22028664 chr14:100766451(-) A-I intron -    22028664 chr14:100766459(-) A-I intron -    22028664 chr14:100766480(-) A-I intron -    22028664 chr14:100766486(-) A-I intron -    22028664 chr14:100766496(-) A-I intron -    22028664 chr14:100766508(-) A-I intron -    22028664 chr14:100766513(-) A-I intron -    22028664 chr14:100766521(-) A-I intron -    22028664 chr14:100766522(-) A-I intron -    22028664 chr14:100766525(-) A-I intron -    22028664 chr14:100766545(-) A-I intron -    22028664 chr14:100766551(-) A-I intron -    22028664 chr14:100766556(-) A-I intron -    22028664 chr14:100766567(-) A-I intron -    22028664 chr14:100766787(-) A-I intron -    22028664 chr14:100766788(-) A-I intron -    22028664 chr14:100766792(-) A-I intron -    22028664 chr14:100766796(-) A-I intron -    22028664 chr14:100766809(-) A-I intron -    22028664 chr14:100766812(-) A-I intron -    22028664 chr14:100766831(-) A-I intron -    22028664 chr14:100766836(-) A-I intron -    22028664 chr14:100766848(-) A-I intron -    22028664 chr14:100762684(-) A-I intron -    21960545 chr14:100762919(-) A-I intron -    21960545 chr14:100763001(-) A-I intron -    21960545 chr14:100763008(-) A-I intron -    21960545 chr14:100763224(-) A-I intron -    21960545 chr14:100763229(-) A-I intron -    21960545 chr14:100763331(-) A-I intron -    21960545 chr14:100763422(-) A-I intron -    21960545 chr14:100763825(-) A-I intron -    21960545 chr14:100766835(-) A-I intron -    21960545 chr14:100762690(-) A-G intron -    22484847 chr14:100762714(-) A-G intron -    22484847 chr14:100763003(-) A-G intron -    22484847 chr14:100763004(-) A-G intron -    22484847 chr14:100763074(-) A-G intron -    22484847 chr14:100763229(-) A-G intron -    22484847 chr14:100763361(-) A-G intron -    22484847 chr14:100766363(-) A-G intron -    22484847 chr14:100767291(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SLC25A29	chr14:100757486-100757487(-) m6A 3'UTR       24284625//24981863 chr14:100757720-100757721(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr14:100757740-100757741(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr14:100757750-100757751(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr14:100757822-100757823(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr14:100757839-100757840(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr14:100757919-100757920(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr14:100757942-100757943(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr14:100757959-100757960(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr14:100758017-100758018(-) m6A 3'UTR       24284625//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr14:100758024-100758025(-) m6A 3'UTR       24284625//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr14:100758106-100758107(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr14:100758133-100758134(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr14:100758143-100758144(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr14:100758208-100758209(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr14:100758310-100758311(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr14:100758320-100758321(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr14:100758419-100758420(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr14:100758457-100758458(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr14:100758571-100758572(-) m6A 3'UTR       24284625//25456834//24981863//28052920//27371828//22575960//22608085 chr14:100758578-100758579(-) m6A 3'UTR       24284625//25456834//24981863//28052920//27371828//22575960//22608085 chr14:100758833-100758834(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085 chr14:100758868-100758869(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085 chr14:100759124-100759125(-) m6A 3'UTR//CDS       24284625//24981863//27371828//27773536//22575960 chr14:100759728-100759729(-) m6A 5'UTR//intron       24284625 chr14:100759774-100759775(-) m6A 5'UTR//intron       24284625 chr14:100759800-100759801(-) m6A 5'UTR//intron       24284625 chr14:100759945-100759946(-) m6A 5'UTR//exon//intron       - chr14:100761463-100761464(-) m6A 5'UTR//intron       27371828 chr14:100761542-100761543(-) m6A 5'UTR//intron       27371828 chr14:100761567-100761568(-) m6A 5'UTR//intron       27371828 chr14:100762201-100762202(-) m6A 5'UTR//CDS//exon//intron       24284625 chr14:100762277-100762278(-) m6A 5'UTR//CDS//exon//intron       24284625 chr14:100762320-100762321(-) m6A 5'UTR//CDS//exon//intron       - chr14:100762352-100762353(-) m6A 5'UTR//intron       - chr14:100762369-100762370(-) m6A 5'UTR//intron       - chr14:100765199-100765200(-) m6A CDS//exon//intron       24284625//25456834 chr14:100765446-100765447(-) m6A exon//intron       24284625//25456834 chr14:100772137-100772138(-) m6A exon//intron       25456834//27773536 chr14:100772558-100772559(-) m6A CDS//exon       25456834//27371828//27773536 chr14:100772576-100772577(-) m6A 5'UTR//exon       25456834//27371828//27773536 chr14:100772646-100772647(-) m6A 5'UTR//exon       24284625//24209618//25456834//24981863//27371828//27773536 chr14:100772757-100772758(-) m6A 5'UTR//exon       24209618//25456834//24981863//27371828//27773536 chr14:100772801-100772802(-) m6A 5'UTR//exon       25456834//24981863//27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SLC25A29	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HeLa-S3 cells     - Exosome Blood     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H5-3p
Interactor2: SLC25A29

Evidence Support:

Prediction-Evidence	cRep//miRanda//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg