Basic Information:

  VIRBase ID:  

VHID00095492

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H5-3p:  MIMAT0008403          ZNF526:  NM_001314033     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H5-3p	ZNF526
miRBase Accession/Entrez ID	MIMAT0008403	116115
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZNF526	chr19:42732065(+) A-I      3'UTR chr19:42732064(+) A-I      3'UTR chr19:42732057(+) A-I      3'UTR chr19:42726339(+) A-I      intronic chr19:42726425(+) A-I      intronic chr19:42726308(+) A-I      intronic chr19:42725710(+) A-I      intronic chr19:42726303(+) A-I      intronic chr19:42732000(+) A-I      3'UTR chr19:42732250(+) A-I      3'UTR chr19:42732276(+) A-I      3'UTR chr19:42731964(+) A-I      3'UTR chr19:42731852(+) A-I      3'UTR chr19:42732227(+) A-I      3'UTR chr19:42732122(+) A-I      3'UTR chr19:42732047(+) A-I      3'UTR chr19:42726084(+) A-I      intronic chr19:42725711(+) A-I      intronic chr19:42725638(+) A-I      intronic chr19:42731661(+) A-I      3'UTR chr19:42732073(+) A-I      3'UTR chr19:42731763(+) A-I      3'UTR chr19:42731832(+) A-I      3'UTR chr19:42731804(+) A-I      3'UTR chr19:42732307(+) A-I      3'UTR chr19:42732317(+) A-I      3'UTR chr19:42732004(+) A-I      3'UTR chr19:42731820(+) A-I      3'UTR chr19:42732096(+) A-I      3'UTR chr19:42732005(+) A-I      3'UTR chr19:42731991(+) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ZNF526	chr19:42731965(+) A-I intron -    21960545 chr19:42731763(+) A-G intron -    22484847 chr19:42731804(+) A-G intron -    22484847 chr19:42732004(+) A-G intron -    22484847 chr19:42732073(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNF526	chr19:42724562-42724563(+) m6A 5'UTR//intron       24284625//24209618//25456834//24981863 chr19:42724605-42724606(+) m6A 5'UTR//intron       24284625//24981863 chr19:42724733-42724734(+) m6A 5'UTR//intron       24981863 chr19:42728396-42728397(+) m6A 5'UTR       24284625//24981863 chr19:42728413-42728414(+) m6A 5'UTR       24284625//24981863 chr19:42728425-42728426(+) m6A 5'UTR       24284625//24981863 chr19:42728438-42728439(+) m6A 5'UTR       24284625//24981863 chr19:42728961-42728962(+) m6A CDS       24284625//24981863 chr19:42728985-42728986(+) m6A CDS       24284625//24981863 chr19:42729282-42729283(+) m1A CDS       26863196 chr19:42729384-42729385(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr19:42729645-42729646(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr19:42729670-42729671(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr19:42730031-42730032(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr19:42730076-42730077(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr19:42730149-42730150(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr19:42730283-42730284(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr19:42730352-42730353(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr19:42730418-42730419(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr19:42730445-42730446(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr19:42730463-42730464(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr19:42730488-42730489(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr19:42730551-42730552(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr19:42730637-42730638(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr19:42730651-42730652(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr19:42730717-42730718(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr19:42730764-42730765(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr19:42730992-42730993(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr19:42731097-42731098(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr19:42731114-42731115(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr19:42731330-42731331(+) m6A 3'UTR       24284625 chr19:42731348-42731349(+) m6A 3'UTR       24284625 chr19:42731382-42731383(+) m6A 3'UTR       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZNF526	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841 Ribosome-free cytosol Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H5-3p
Interactor2: ZNF526

Evidence Support:

Prediction-Evidence	cRep//miRanda//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg