Basic Information:

  VIRBase ID:  

VHID00095420

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H5-3p:  MIMAT0008403          SPSB4:  NM_080862     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H5-3p	SPSB4
miRBase Accession/Entrez ID	MIMAT0008403	92369
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	SSB-4//SSB4

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SPSB4	chr3:140785058-140785059(+) m6A CDS       25456834 chr3:140785070-140785071(+) m6A CDS       25456834 chr3:140785115-140785116(+) m6A CDS       25456834 chr3:140785124-140785125(+) m6A CDS       25456834 chr3:140785373-140785374(+) m6A CDS       25456834 chr3:140785409-140785410(+) m6A CDS       25456834 chr3:140785490-140785491(+) m6A CDS       25456834 chr3:140851145-140851146(+) m6A 3'UTR//intron       - chr3:140866004-140866005(+) m6A 3'UTR//CDS//exon       25456834 chr3:140866055-140866056(+) m6A 3'UTR//CDS//exon       25456834//24981863//22608085 chr3:140866091-140866092(+) m6A 3'UTR//CDS//exon       25456834//24981863//22608085 chr3:140866134-140866135(+) m6A 3'UTR//exon       25456834//24981863//22608085 chr3:140866140-140866141(+) m6A 3'UTR//exon       25456834//24981863//22608085 chr3:140866227-140866228(+) m6A 3'UTR//exon       25456834//22608085 chr3:140866246-140866247(+) m6A 3'UTR//exon       24209618//25456834//22608085 chr3:140866329-140866330(+) m6A 3'UTR       22608085 chr3:140866395-140866396(+) m6A 3'UTR       24981863//22608085 chr3:140866454-140866455(+) m6A 3'UTR       24981863//22608085 chr3:140866469-140866470(+) m6A 3'UTR       24981863//22608085 chr3:140866495-140866496(+) m6A 3'UTR       24981863//22608085 chr3:140866627-140866628(+) m6A 3'UTR       24209618//25456834//24981863//22608085 chr3:140866647-140866648(+) m6A 3'UTR       24209618//25456834//24981863//22608085 chr3:140866673-140866674(+) m6A 3'UTR       24209618//25456834//24981863//22608085 chr3:140866686-140866687(+) m6A 3'UTR       24209618//25456834//24981863//22608085 chr3:140866702-140866703(+) m6A 3'UTR       24209618//25456834//24981863//22608085 chr3:140866797-140866798(+) m6A 3'UTR       24209618//25456834//24981863//22608085 chr3:140866905-140866906(+) m6A 3'UTR       24209618//25456834//24981863//22608085 chr3:140866937-140866938(+) m6A 3'UTR       24209618//25456834//24981863//22608085 chr3:140867084-140867085(+) m6A 3'UTR       24209618

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SPSB4	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H5-3p
Interactor2: SPSB4

Evidence Support:

Prediction-Evidence	cRep//miRanda//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg