Basic Information:

  VIRBase ID:  

VHID00091984

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H4-3p:  MIMAT0008402          FREM2:  NM_207361     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H4-3p	FREM2
miRBase Accession/Entrez ID	MIMAT0008402	341640
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CRYPTOP//FRASRS2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	FREM2	chr13:39426967(+) A-I      intronic chr13:39426991(+) A-I      intronic chr13:39426959(+) A-I      intronic chr13:39426968(+) A-I      intronic chr13:39426971(+) A-I      intronic chr13:39426987(+) A-I      intronic chr13:39427444(+) A-I      intronic chr13:39427443(+) A-I      intronic chr13:39427003(+) A-I      intronic chr13:39427371(+) A-I      intronic chr13:39427040(+) A-I      intronic chr13:39427090(+) A-I      intronic chr13:39312556(+) A-I      intronic chr13:39427026(+) A-I      intronic chr13:39427077(+) A-I      intronic chr13:39427345(+) A-I      intronic chr13:39426954(+) A-I      intronic chr13:39427399(+) A-I      intronic chr13:39426911(+) A-I      intronic chr13:39427456(+) A-I      intronic chr13:39427350(+) A-I      intronic chr13:39427417(+) A-I      intronic chr13:39426935(+) A-I      intronic chr13:39427203(+) A-I      intronic chr13:39426890(+) A-I      intronic chr13:39426942(+) A-I      intronic chr13:39312545(+) A-I      intronic chr13:39347073(+) A-I      intronic chr13:39312572(+) A-I      intronic chr13:39288960(+) A-I      intronic chr13:39427063(+) A-I      intronic chr13:39312551(+) A-I      intronic chr13:39427405(+) A-I      intronic chr13:39426981(+) A-I      intronic chr13:39426893(+) A-I      intronic chr13:39426975(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FREM2	chr13:39261364-39261365(+) m6A 5'UTR       - chr13:39261788-39261789(+) m6A CDS       22608085 chr13:39261812-39261813(+) m6A CDS       22608085 chr13:39261926-39261927(+) m6A CDS       25456834//22608085 chr13:39262034-39262035(+) m6A CDS       25456834//24981863//22608085 chr13:39262066-39262067(+) m6A CDS       25456834//24981863//22608085 chr13:39262117-39262118(+) m6A CDS       25456834//24981863//22608085 chr13:39262176-39262177(+) m6A CDS       25456834//24981863//22608085 chr13:39262231-39262232(+) m6A CDS       25456834//24981863//22608085 chr13:39262244-39262245(+) m6A CDS       25456834//24981863//22608085 chr13:39262263-39262264(+) m6A CDS       25456834//24981863//22608085 chr13:39262307-39262308(+) m6A CDS       25456834//24981863//22608085 chr13:39262313-39262314(+) m6A CDS       25456834//24981863//22608085 chr13:39262424-39262425(+) m6A CDS       25456834//24981863//22608085 chr13:39262472-39262473(+) m6A CDS       25456834//24981863//22608085 chr13:39262502-39262503(+) m6A CDS       24981863//22608085 chr13:39262682-39262683(+) m6A CDS       25456834//24981863//22608085 chr13:39262707-39262708(+) m6A CDS       25456834//24981863//22608085 chr13:39262748-39262749(+) m6A CDS       25456834//24981863//22608085 chr13:39262784-39262785(+) m6A CDS       25456834//24981863//22608085 chr13:39262880-39262881(+) m6A CDS       22608085 chr13:39263206-39263207(+) m6A CDS       24981863//22608085 chr13:39263323-39263324(+) m6A CDS       25456834//24981863//22608085 chr13:39263349-39263350(+) m6A CDS       25456834//24981863//22608085 chr13:39263395-39263396(+) m6A CDS       25456834//24981863//22608085 chr13:39263420-39263421(+) m6A CDS       25456834//24981863//22608085 chr13:39263448-39263449(+) m6A CDS       25456834//24981863//22608085 chr13:39263483-39263484(+) m6A CDS       25456834//24981863//22608085 chr13:39263675-39263676(+) m6A CDS       25456834//24981863//22608085 chr13:39263691-39263692(+) m6A CDS       25456834//24981863//22608085 chr13:39263723-39263724(+) m6A CDS       25456834//24981863//22608085 chr13:39263841-39263842(+) m6A CDS       25456834//24981863//22608085 chr13:39263856-39263857(+) m6A CDS       24981863//22608085 chr13:39263903-39263904(+) m6A CDS       24981863//22608085 chr13:39263957-39263958(+) m6A CDS       24981863//22608085 chr13:39264028-39264029(+) m6A CDS       25456834//24981863//22608085 chr13:39264053-39264054(+) m6A CDS       25456834//24981863//22608085 chr13:39264099-39264100(+) m6A CDS       25456834//24981863//22608085 chr13:39264123-39264124(+) m6A CDS       24981863//22608085 chr13:39264161-39264162(+) m6A CDS       24981863//22608085 chr13:39264168-39264169(+) m6A CDS       24981863//22608085 chr13:39264200-39264201(+) m6A CDS       24981863//22608085 chr13:39264243-39264244(+) m6A CDS       22608085 chr13:39264394-39264395(+) m6A CDS       22608085 chr13:39264406-39264407(+) m6A CDS       22608085 chr13:39264503-39264504(+) m6A CDS       24981863//22608085 chr13:39264699-39264700(+) m6A CDS       22608085 chr13:39264830-39264831(+) m6A CDS       22608085 chr13:39264920-39264921(+) m6A CDS       24981863//22608085 chr13:39264951-39264952(+) m6A CDS       24981863//22608085 chr13:39264962-39264963(+) m6A CDS       24981863//22608085 chr13:39265008-39265009(+) m6A CDS       24981863//22608085 chr13:39265047-39265048(+) m6A CDS       24981863//22608085 chr13:39265294-39265295(+) m6A CDS       24981863//22608085 chr13:39265304-39265305(+) m6A CDS       24981863//22608085 chr13:39265320-39265321(+) m6A CDS       24981863//22608085 chr13:39265413-39265414(+) m6A CDS       24981863//22608085 chr13:39265487-39265488(+) m6A CDS       24981863//22608085 chr13:39265524-39265525(+) m6A CDS       24981863//22608085 chr13:39265548-39265549(+) m6A CDS       24981863//22608085 chr13:39265607-39265608(+) m6A CDS       24981863//22608085 chr13:39265613-39265614(+) m6A CDS       24981863//22608085 chr13:39265655-39265656(+) m6A CDS       24981863//22608085 chr13:39265805-39265806(+) m6A CDS       24981863//22608085 chr13:39265829-39265830(+) m6A CDS       24981863//22608085 chr13:39265844-39265845(+) m6A CDS       24981863//22608085 chr13:39265949-39265950(+) m6A CDS       24981863//22608085 chr13:39265994-39265995(+) m6A CDS       24981863//22608085 chr13:39266041-39266042(+) m6A CDS       22608085 chr13:39266069-39266070(+) m6A CDS       22608085 chr13:39266123-39266124(+) m6A CDS       22608085 chr13:39266159-39266160(+) m6A CDS       22608085 chr13:39266241-39266242(+) m6A CDS       22608085 chr13:39266267-39266268(+) m6A CDS       24981863//22608085 chr13:39266279-39266280(+) m6A CDS       24981863//22608085 chr13:39266295-39266296(+) m6A CDS       24981863//22608085 chr13:39266360-39266361(+) m6A CDS       24981863//22608085 chr13:39266392-39266393(+) m6A CDS       24981863//22608085 chr13:39266400-39266401(+) m6A CDS       24981863//22608085 chr13:39266543-39266544(+) m6A CDS       24981863//22608085 chr13:39266549-39266550(+) m6A CDS       24981863//22608085 chr13:39266618-39266619(+) m6A CDS       22608085 chr13:39454475-39454476(+) m6A CDS       25456834//24981863//22608085 chr13:39454619-39454620(+) m6A CDS       25456834//24981863//22608085 chr13:39454630-39454631(+) m6A CDS       25456834//24981863//22608085 chr13:39454655-39454656(+) m6A CDS       25456834//24981863//22608085 chr13:39454981-39454982(+) m6A 3'UTR       25456834//24981863//22608085 chr13:39455001-39455002(+) m6A 3'UTR       25456834//24981863//22608085 chr13:39455103-39455104(+) m6A 3'UTR       25456834//24981863//22608085 chr13:39455199-39455200(+) m6A 3'UTR       24981863//22608085 chr13:39455247-39455248(+) m6A 3'UTR       22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	FREM2	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H4-3p
Interactor2: FREM2

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg