Basic Information:

  VIRBase ID:  

VHID00091936

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H4-3p:  MIMAT0008402          ZNF493:  NM_175910     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H4-3p	ZNF493
miRBase Accession/Entrez ID	MIMAT0008402	284443
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZNF493	chr19:21588872(+) A-I      intronic chr19:21584584(+) A-I      intronic chr19:21588863(+) A-I      intronic chr19:21604695(+) A-I      intronic chr19:21604691(+) A-I      intronic chr19:21584576(+) A-I      intronic chr19:21590001(+) A-I      intronic chr19:21584566(+) A-I      intronic chr19:21588874(+) A-I      intronic chr19:21588873(+) A-I      intronic chr19:21588866(+) A-I      intronic chr19:21584588(+) A-I      intronic chr19:21584592(+) A-I      intronic chr19:21592456(+) A-I      intronic chr19:21592481(+) A-I      intronic chr19:21592507(+) A-I      intronic chr19:21582006(+) A-I      intronic chr19:21593768(+) A-I      intronic chr19:21594266(+) A-I      intronic chr19:21594442(+) A-I      intronic chr19:21594447(+) A-I      intronic chr19:21594454(+) A-I      intronic chr19:21603690(+) A-I      intronic chr19:21594629(+) A-I      intronic chr19:21604717(+) A-I      intronic chr19:21582224(+) A-I      intronic chr19:21583131(+) A-I      intronic chr19:21588930(+) A-I      intronic chr19:21588946(+) A-I      intronic chr19:21588969(+) A-I      intronic chr19:21589900(+) A-I      intronic chr19:21590134(+) A-I      intronic chr19:21590232(+) A-I      intronic chr19:21591813(+) A-I      intronic chr19:21591890(+) A-I      intronic chr19:21591947(+) A-I      intronic chr19:21591938(+) A-I      intronic chr19:21604333(+) A-I      intronic chr19:21592432(+) A-I      intronic chr19:21604261(+) A-I      intronic chr19:21604387(+) A-I      intronic chr19:21582099(+) A-I      intronic chr19:21590997(+) A-I      3'UTR chr19:21603830(+) A-I      intronic chr19:21589966(+) A-I      intronic chr19:21582959(+) A-I      intronic chr19:21589963(+) A-I      intronic chr19:21593724(+) A-I      intronic chr19:21604254(+) A-I      intronic chr19:21593777(+) A-I      intronic chr19:21588790(+) A-I      intronic chr19:21582128(+) A-I      intronic chr19:21588862(+) A-I      intronic chr19:21593801(+) A-I      intronic chr19:21590024(+) A-I      intronic chr19:21584532(+) A-I      intronic chr19:21583137(+) A-I      intronic chr19:21594401(+) A-I      intronic chr19:21582169(+) A-I      intronic chr19:21604741(+) A-I      intronic chr19:21583011(+) A-I      intronic chr19:21594375(+) A-I      intronic chr19:21590243(+) A-I      intronic chr19:21590171(+) A-I      intronic chr19:21604862(+) A-I      intronic chr19:21592436(+) A-I      intronic chr19:21592420(+) A-I      intronic chr19:21590220(+) A-I      intronic chr19:21594610(+) A-I      intronic chr19:21583138(+) A-I      intronic chr19:21592462(+) A-I      intronic chr19:21591067(+) A-I      3'UTR chr19:21583003(+) A-I      intronic chr19:21582184(+) A-I      intronic chr19:21590236(+) A-I      intronic chr19:21590177(+) A-I      intronic chr19:21583065(+) A-I      intronic chr19:21591826(+) A-I      intronic chr19:21588848(+) A-I      intronic chr19:21591767(+) A-I      intronic chr19:21588973(+) A-I      intronic chr19:21590365(+) A-I      3'UTR chr19:21583162(+) A-I      intronic chr19:21590004(+) A-I      intronic chr19:21588794(+) A-I      intronic chr19:21604350(+) A-I      intronic chr19:21584700(+) A-I      intronic chr19:21590230(+) A-I      intronic chr19:21588837(+) A-I      intronic chr19:21592400(+) A-I      intronic chr19:21591816(+) A-I      intronic chr19:21593734(+) A-I      intronic chr19:21583052(+) A-I      intronic chr19:21594339(+) A-I      intronic chr19:21583026(+) A-I      intronic chr19:21591141(+) A-I      3'UTR chr19:21583047(+) A-I      intronic chr19:21583091(+) A-I      intronic chr19:21583097(+) A-I      intronic chr19:21584569(+) A-I      intronic chr19:21583053(+) A-I      intronic chr19:21583169(+) A-I      intronic chr19:21588836(+) A-I      intronic chr19:21583108(+) A-I      intronic chr19:21591804(+) A-I      intronic chr19:21605321(+) A-I      intronic chr19:21583028(+) A-I      intronic chr19:21591828(+) A-I      intronic chr19:21593688(+) A-I      intronic chr19:21591111(+) A-I      3'UTR chr19:21583101(+) A-I      intronic chr19:21588903(+) A-I      intronic chr19:21591166(+) A-I      3'UTR chr19:21590353(+) A-I      3'UTR chr19:21592321(+) A-I      intronic chr19:21590267(+) A-I      intronic chr19:21582092(+) A-I      intronic chr19:21588974(+) A-I      intronic chr19:21590352(+) A-I      3'UTR chr19:21583022(+) A-I      intronic chr19:21591703(+) A-I      intronic chr19:21604897(+) A-I      intronic chr19:21582958(+) A-I      intronic chr19:21584497(+) A-I      intronic chr19:21583010(+) A-I      intronic chr19:21590217(+) A-I      intronic chr19:21594260(+) A-I      intronic chr19:21583085(+) A-I      intronic chr19:21591751(+) A-I      intronic chr19:21590256(+) A-I      intronic chr19:21604781(+) A-I      intronic chr19:21582236(+) A-I      intronic chr19:21588859(+) A-I      intronic chr19:21591893(+) A-I      intronic chr19:21588813(+) A-I      intronic chr19:21604752(+) A-I      intronic chr19:21582089(+) A-I      intronic chr19:21584976(+) A-I      intronic chr19:21592488(+) A-I      intronic chr19:21591704(+) A-I      intronic chr19:21594362(+) A-I      intronic chr19:21588904(+) A-I      intronic chr19:21604410(+) A-I      intronic chr19:21584675(+) A-I      intronic chr19:21603634(+) A-I      intronic chr19:21593740(+) A-I      intronic chr19:21590290(+) A-I      NonSyn:His->Arg

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ZNF493	chr19:21582169(+) A-G intron -    22484847 chr19:21583138(+) A-G intron -    22484847 chr19:21590004(+) A-G intron -    22484847 chr19:21590031(+) A-G intron -    22484847 chr19:21590353(+) A-G intron -    22484847 chr19:21594665(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNF493	chr19:21605738-21605739(+) m6A 3'UTR//5'UTR//CDS//exon       24981863 chr19:21605808-21605809(+) m6A 3'UTR//5'UTR//CDS       24981863//22608085 chr19:21605883-21605884(+) m6A CDS       24981863//22608085 chr19:21605888-21605889(+) m6A CDS       24981863//22608085 chr19:21605955-21605956(+) m6A CDS       24981863//22608085 chr19:21605973-21605974(+) m6A CDS       24981863//22608085 chr19:21605985-21605986(+) m6A CDS       24981863//22608085 chr19:21606000-21606001(+) m6A CDS       22608085 chr19:21606141-21606142(+) m6A CDS       22608085 chr19:21606206-21606207(+) m6A CDS       24981863//22608085 chr19:21606212-21606213(+) m6A CDS       24981863//22608085 chr19:21606243-21606244(+) m6A CDS       24981863//22608085 chr19:21606249-21606250(+) m6A CDS       24981863//22608085 chr19:21606333-21606334(+) m6A CDS       24981863//22608085 chr19:21606348-21606349(+) m6A CDS       24981863//22608085 chr19:21606361-21606362(+) m6A CDS       24981863//22608085 chr19:21606390-21606391(+) m6A CDS       24981863//22608085 chr19:21606417-21606418(+) m6A CDS       24981863//22608085 chr19:21606474-21606475(+) m6A CDS       22608085 chr19:21607650-21607651(+) m6A CDS       22608085 chr19:21607673-21607674(+) m6A CDS       22608085 chr19:21607734-21607735(+) m6A CDS       24981863//22608085 chr19:21607771-21607772(+) m6A CDS       24981863//22608085 chr19:21608206-21608207(+) m6A 3'UTR       24981863 chr19:21608648-21608649(+) m6A 3'UTR       22608085 chr19:21608695-21608696(+) m6A 3'UTR       22608085 chr19:21608705-21608706(+) m6A 3'UTR       22608085 chr19:21608730-21608731(+) m6A 3'UTR       22608085 chr19:21608787-21608788(+) m6A 3'UTR       22608085 chr19:21608814-21608815(+) m6A 3'UTR       22608085 chr19:21608898-21608899(+) m6A 3'UTR       24981863//22608085 chr19:21608907-21608908(+) m6A 3'UTR       24981863//22608085 chr19:21608945-21608946(+) m6A 3'UTR       24981863//22608085 chr19:21609078-21609079(+) m6A 3'UTR       24981863 chr19:21609158-21609159(+) m6A 3'UTR       24981863//22608085 chr19:21609198-21609199(+) m6A 3'UTR       24981863//22608085 chr19:21609309-21609310(+) m6A 3'UTR       24981863//22608085 chr19:21609386-21609387(+) m6A 3'UTR       24981863//22608085 chr19:21609406-21609407(+) m6A 3'UTR       24981863//22608085 chr19:21609471-21609472(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZNF493	Exosome Blood     - Nucleoplasm K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H4-3p
Interactor2: ZNF493

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg