Basic Information:

  VIRBase ID:  

VHID00091910

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H4-3p:  MIMAT0008402          STEAP2:  NM_001244944     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H4-3p	STEAP2
miRBase Accession/Entrez ID	MIMAT0008402	261729
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	IPCA1//PCANAP1//PUMPCn//STAMP1//STMP

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	STEAP2	chr7:89869555(+) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	STEAP2	chr7:89863926(+) A-G intron -    21725310 chr7:89864060(+) A-G intron -    21725310

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	STEAP2	chr7:89845839-89845840(+) m6A 5'UTR//exon//intron       22608085 chr7:89854651-89854652(+) m6A CDS//exon       24981863//26404942//22608085 chr7:89854683-89854684(+) m6A CDS//exon       24981863//26404942//22608085 chr7:89854703-89854704(+) m6A CDS//exon       24981863//26404942//22608085 chr7:89854710-89854711(+) m6A CDS//exon       24981863//26404942//22608085 chr7:89854763-89854764(+) m6A CDS//exon       24981863//26404942//22608085 chr7:89856516-89856517(+) m6A CDS       24981863//22608085 chr7:89856563-89856564(+) m6A CDS       24981863//22608085 chr7:89859324-89859325(+) m6A CDS       24981863 chr7:89861756-89861757(+) m6A CDS//intron       24981863//22608085 chr7:89866086-89866087(+) m6A 3'UTR//intron       24981863//22608085 chr7:89866231-89866232(+) m6A 3'UTR//CDS//intron       25456834//24981863//22608085 chr7:89866242-89866243(+) m6A 3'UTR//CDS//intron       25456834//24981863//22608085 chr7:89866491-89866492(+) m6A 3'UTR//intron       25456834//24981863//22608085 chr7:89866500-89866501(+) m6A 3'UTR//intron       25456834//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	STEAP2	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H4-3p
Interactor2: STEAP2

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg