Basic Information:

  VIRBase ID:  

VHID00091710

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H4-3p:  MIMAT0008402          PDIK1L:  NM_001243533     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H4-3p	PDIK1L
miRBase Accession/Entrez ID	MIMAT0008402	149420
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CLIK1L//STK35L2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PDIK1L	chr1:26443758(+) A-I      intronic chr1:26444273(+) A-I      intronic chr1:26444113(+) A-I      intronic chr1:26442622(+) A-I      intronic chr1:26442643(+) A-I      intronic chr1:26443310(+) A-I      intronic chr1:26444183(+) A-I      intronic chr1:26442573(+) A-I      intronic chr1:26442626(+) A-I      intronic chr1:26443723(+) A-I      intronic chr1:26442836(+) A-I      intronic chr1:26442513(+) A-I      intronic chr1:26445649(+) A-I      intronic chr1:26443732(+) A-I      intronic chr1:26443640(+) A-I      intronic chr1:26443407(+) A-I      intronic chr1:26442759(+) A-I      intronic chr1:26442819(+) A-I      intronic chr1:26442938(+) A-I      intronic chr1:26442769(+) A-I      intronic chr1:26443652(+) A-I      intronic chr1:26445676(+) A-I      intronic chr1:26443387(+) A-I      intronic chr1:26443999(+) A-I      intronic chr1:26443616(+) A-I      intronic chr1:26443227(+) A-I      intronic chr1:26443404(+) A-I      intronic chr1:26442560(+) A-I      intronic chr1:26443271(+) A-I      intronic chr1:26442883(+) A-I      intronic chr1:26442885(+) A-I      intronic chr1:26443270(+) A-I      intronic chr1:26442768(+) A-I      intronic chr1:26444490(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PDIK1L	chr1:26442819(+) A-I intron -    22327324 chr1:26442626(+) A-G intron -    22484847 chr1:26442759(+) A-G intron -    22484847 chr1:26442819(+) A-G intron -    22484847 chr1:26443616(+) A-G intron -    22484847 chr1:26443652(+) A-G intron -    22484847 chr1:26443743(+) G-A intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PDIK1L	chr1:26448336-26448337(+) m6A CDS       22608085 chr1:26448446-26448447(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr1:26448459-26448460(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr1:26448514-26448515(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr1:26448564-26448565(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr1:26448590-26448591(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr1:26448649-26448650(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:26448659-26448660(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:26448673-26448674(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:26448702-26448703(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:26448737-26448738(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:26448814-26448815(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:26448822-26448823(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:26448833-26448834(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:26448854-26448855(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:26448861-26448862(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:26448911-26448912(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:26448956-26448957(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:26448985-26448986(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:26449013-26449014(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr1:26449019-26449020(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr1:26449160-26449161(+) m6A 3'UTR       22608085 chr1:26449741-26449742(+) m6A 3'UTR       24981863 chr1:26449784-26449785(+) m6A 3'UTR       24981863 chr1:26449976-26449977(+) m6A 3'UTR       24284625//24981863//22608085 chr1:26449992-26449993(+) m6A 3'UTR       24284625//24981863//22608085 chr1:26450024-26450025(+) m6A 3'UTR       24284625//24981863//22608085 chr1:26450060-26450061(+) m6A 3'UTR       24284625//24981863//22608085 chr1:26450169-26450170(+) m6A 3'UTR       22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PDIK1L	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H4-3p
Interactor2: PDIK1L

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg