Basic Information:

  VIRBase ID:  

VHID00091703

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H4-3p:  MIMAT0008402          SLC30A7:  NM_001144884     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H4-3p	SLC30A7
miRBase Accession/Entrez ID	MIMAT0008402	148867
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ZnT-7//ZNT7//ZnTL2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SLC30A7	chr1:101389076(+) A-I      intronic chr1:101389135(+) A-I      intronic chr1:101389171(+) A-I      intronic chr1:101389060(+) A-I      intronic chr1:101389172(+) A-I      intronic chr1:101398782(+) A-I      intronic chr1:101398804(+) A-I      intronic chr1:101405284(+) A-I      intronic chr1:101405290(+) A-I      intronic chr1:101388690(+) A-I      intronic chr1:101389079(+) A-I      intronic chr1:101389256(+) A-I      intronic chr1:101389187(+) A-I      intronic chr1:101409705(+) A-I      intronic chr1:101377235(+) A-I      intronic chr1:101389176(+) A-I      intronic chr1:101389214(+) A-I      intronic chr1:101378122(+) A-I      intronic chr1:101398580(+) A-I      intronic chr1:101389175(+) A-I      intronic chr1:101409717(+) A-I      intronic chr1:101389105(+) A-I      intronic chr1:101397776(+) A-I      intronic chr1:101389169(+) A-I      intronic chr1:101409738(+) A-I      intronic chr1:101397716(+) A-I      intronic chr1:101409631(+) A-I      intronic chr1:101389174(+) A-I      intronic chr1:101389062(+) A-I      intronic chr1:101389078(+) A-I      intronic chr1:101391366(+) A-I      intronic chr1:101389212(+) A-I      intronic chr1:101389095(+) A-I      intronic chr1:101443334(+) A-I      3'UTR chr1:101378354(+) A-I      intronic chr1:101389072(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	SLC30A7	chr1:101382030(+) T-C intron -    22484847 chr1:101389062(+) A-G intron -    22484847 chr1:101389072(+) A-G intron -    22484847 chr1:101389078(+) A-G intron -    22484847 chr1:101389079(+) A-G intron -    22484847 chr1:101389095(+) A-G intron -    22484847 chr1:101389105(+) A-G intron -    22484847 chr1:101389175(+) A-G intron -    22484847 chr1:101389212(+) A-G intron -    22484847 chr1:101389214(+) A-G intron -    22484847 chr1:101397696(+) C-G intron -    22484847 chr1:101397716(+) A-G intron -    22484847 chr1:101397740(+) G-A intron -    22484847 chr1:101397776(+) A-G intron -    22484847 chr1:101398580(+) A-G intron -    22484847 chr1:101409631(+) A-G intron -    22484847 chr1:101409705(+) A-G intron -    22484847 chr1:101409738(+) A-G intron -    22484847 chr1:101441206(+) T-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SLC30A7	chr1:101444836-101444837(+) m6A 3'UTR       27773535 chr1:101444883-101444884(+) m6A 3'UTR       27773535 chr1:101444908-101444909(+) m6A 3'UTR       27773535 chr1:101444952-101444953(+) m6A 3'UTR       27773535 chr1:101445032-101445033(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SLC30A7	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol HCC cell line (HepG2)     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H4-3p
Interactor2: SLC30A7

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg