Basic Information:

  VIRBase ID:  

VHID00090665

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H4-3p:  MIMAT0008402          MYLIP:  NM_013262     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H4-3p	MYLIP
miRBase Accession/Entrez ID	MIMAT0008402	29116
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	IDOL//MIR

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MYLIP	chr6:16139521(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MYLIP	chr6:16129419-16129420(+) m6A 5'UTR       24284625//24981863 chr6:16129626-16129627(+) m6A 5'UTR//CDS       24284625//24209618 chr6:16130828-16130829(+) m6A CDS//intron       24284625 chr6:16145210-16145211(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr6:16145251-16145252(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr6:16145309-16145310(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr6:16145324-16145325(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr6:16145375-16145376(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr6:16145410-16145411(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr6:16147001-16147002(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr6:16147020-16147021(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr6:16147035-16147036(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr6:16147148-16147149(+) m6A 3'UTR       24284625//24981863//22608085 chr6:16147186-16147187(+) m6A 3'UTR       24284625//22608085 chr6:16147210-16147211(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MYLIP	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Nucleus K562 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H4-3p
Interactor2: MYLIP

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg