Basic Information:

  VIRBase ID:  

VHID00089744

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H4-3p:  MIMAT0008402          MASP1:  NR_033519     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H4-3p	MASP1
miRBase Accession/Entrez ID	MIMAT0008402	5648
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	3MC1//CRARF//CRARF1//MAP1//MAp44//MASP//MASP3//PRSS5//RaRF

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MASP1	chr3:186958643(-) A-I      intronic chr3:186958623(-) A-I      intronic chr3:186957079(-) A-I      intronic chr3:186956948(-) A-I      intronic chr3:186957055(-) A-I      intronic chr3:186957054(-) A-I      intronic chr3:186956914(-) A-I      intronic chr3:186956886(-) A-I      intronic chr3:186960237(-) A-I      intronic chr3:186991823(-) A-I      intronic chr3:186958718(-) A-I      intronic chr3:186958505(-) A-I      intronic chr3:186957089(-) A-I      intronic chr3:186958498(-) A-I      intronic chr3:186957078(-) A-I      intronic chr3:186957102(-) A-I      intronic chr3:186956968(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MASP1	chr3:186937412-186937413(-) m6A 3'UTR       27773535 chr3:186952547-186952548(-) m6A 3'UTR//exon//intron       27773535 chr3:186952576-186952577(-) m6A 3'UTR//exon//intron       27773535 chr3:186953114-186953115(-) m6A 3'UTR//exon//intron       27773535 chr3:186953280-186953281(-) m6A 3'UTR//exon//intron       27773535 chr3:186953327-186953328(-) m6A 3'UTR//exon//intron       27773535 chr3:186953339-186953340(-) m6A 3'UTR//exon//intron       27773535 chr3:186953373-186953374(-) m6A 3'UTR//exon//intron       27773535 chr3:186953388-186953389(-) m6A 3'UTR//exon//intron       27773535 chr3:186953532-186953533(-) m6A CDS//exon//intron       27773535 chr3:186953594-186953595(-) m6A CDS//exon//intron       25456834//27773535 chr3:186953685-186953686(-) m6A CDS//exon//intron       25456834//27773535 chr3:186953721-186953722(-) m6A CDS//exon//intron       25456834//27773535 chr3:186953764-186953765(-) m6A CDS//exon//intron       25456834//27773535 chr3:186953824-186953825(-) m6A CDS//exon//intron       25456834//27773535 chr3:186953960-186953961(-) m6A CDS//exon//intron       25456834//27773535 chr3:186954012-186954013(-) m6A CDS//exon//intron       27773535 chr3:186954027-186954028(-) m6A CDS//exon//intron       27773535 chr3:186954078-186954079(-) m6A CDS//exon//intron       27773535 chr3:186954144-186954145(-) m6A CDS//exon//intron       25456834//27773535 chr3:186954246-186954247(-) m6A CDS//exon//intron       25456834//27773535 chr3:186962738-186962739(-) m6A exon//intron       27773535 chr3:186964151-186964152(-) m6A 3'UTR//intron       27773535 chr3:186964180-186964181(-) m6A 3'UTR//intron       27773535 chr3:186964216-186964217(-) m6A 3'UTR//intron       27773535 chr3:186964241-186964242(-) m6A 3'UTR//intron       27773535 chr3:186964259-186964260(-) m6A 3'UTR//intron       27773535 chr3:186964306-186964307(-) m6A 3'UTR//intron       27773535 chr3:186964339-186964340(-) m6A 3'UTR//intron       27773535 chr3:186964347-186964348(-) m6A 3'UTR//intron       27773535 chr3:186964402-186964403(-) m6A 3'UTR//intron       27773535 chr3:186964710-186964711(-) m6A 3'UTR//intron       27773535 chr3:186964715-186964716(-) m6A 3'UTR//intron       27773535 chr3:186964802-186964803(-) m6A 3'UTR//intron       27773535 chr3:186964848-186964849(-) m6A 3'UTR//intron       27773535 chr3:186964908-186964909(-) m6A 3'UTR//intron       27773535 chr3:186964985-186964986(-) m6A 3'UTR//intron       27773535 chr3:186965069-186965070(-) m6A 3'UTR//intron       27773535 chr3:186965095-186965096(-) m6A 3'UTR//intron       27773535 chr3:186965111-186965112(-) m6A 3'UTR//intron       27773535 chr3:186965147-186965148(-) m6A CDS//intron       27773535 chr3:186968100-186968101(-) m6A CDS//intron       27773535 chr3:186974488-186974489(-) m6A CDS//exon//intron       27773535 chr3:186974506-186974507(-) m6A CDS//exon//intron       27773535 chr3:186974584-186974585(-) m6A CDS//exon//intron       27773535 chr3:186974615-186974616(-) m6A CDS//exon//intron       27773535 chr3:186978537-186978538(-) m6A CDS//exon//intron       27773535 chr3:186978545-186978546(-) m6A CDS//exon//intron       27773535 chr3:187009230-187009231(-) m6A 5'UTR//intron       - chr3:187009457-187009458(-) m6A 5'UTR//intron       25456834//27773535 chr3:187009501-187009502(-) m6A 5'UTR//CDS//exon       25456834//27773535 chr3:187009521-187009522(-) m6A 5'UTR//CDS//exon       25456834//27773535 chr3:187009529-187009530(-) m6A 5'UTR//CDS//exon       25456834//27773535 chr3:187009539-187009540(-) m6A 5'UTR//CDS//exon       25456834//27773535 chr3:187009692-187009693(-) m6A 5'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MASP1	Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H4-3p
Interactor2: MASP1

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg