Basic Information:

  VIRBase ID:  

VHID00089439

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H4-3p:  MIMAT0008402          GJA5:  NM_005266     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H4-3p	GJA5
miRBase Accession/Entrez ID	MIMAT0008402	2702
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ATFB11//CX40

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	GJA5	chr1:147236821(-) A-I      intronic chr1:147236811(-) A-I      intronic chr1:147236768(-) A-I      intronic chr1:147236742(-) A-I      intronic chr1:147236864(-) A-I      intronic chr1:147236784(-) A-I      intronic chr1:147236730(-) A-I      intronic chr1:147236729(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	GJA5	chr1:147229223-147229224(-) m6A 3'UTR       25456834 chr1:147229771-147229772(-) m6A 3'UTR       25456834 chr1:147229811-147229812(-) m6A 3'UTR       25456834 chr1:147229828-147229829(-) m6A 3'UTR       25456834 chr1:147230195-147230196(-) m6A 3'UTR       25456834 chr1:147230234-147230235(-) m6A 3'UTR       25456834 chr1:147230950-147230951(-) m6A CDS       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	GJA5	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H4-3p
Interactor2: GJA5

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg