Basic Information:

  VIRBase ID:  

VHID00089144

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H4-5p:  MIMAT0008401          SLC35E2B:  NM_001290264     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H4-5p	SLC35E2B
miRBase Accession/Entrez ID	MIMAT0008401	728661
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	SLC35E2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SLC35E2B	chr1:1665868(-) A-I      intronic chr1:1665848(-) A-I      intronic chr1:1665715(-) A-I      intronic chr1:1658517(-) A-I      intronic chr1:1658497(-) A-I      intronic chr1:1658483(-) A-I      intronic chr1:1658475(-) A-I      intronic chr1:1658474(-) A-I      intronic chr1:1660683(-) A-I      3'UTR chr1:1660685(-) A-I      3'UTR chr1:1660688(-) A-I      3'UTR chr1:1660689(-) A-I      3'UTR chr1:1660691(-) A-I      3'UTR chr1:1664404(-) A-I      intronic chr1:1656557(-) A-I      3'UTR chr1:1663329(-) A-I      3'UTR chr1:1594993(-) A-I      3'UTR chr1:1595083(-) A-I      3'UTR chr1:1660987(-) A-I      3'UTR chr1:1660998(-) A-I      3'UTR chr1:1661002(-) A-I      3'UTR chr1:1661015(-) A-I      3'UTR chr1:1661033(-) A-I      3'UTR chr1:1661055(-) A-I      3'UTR chr1:1662620(-) A-I      3'UTR chr1:1662647(-) A-I      3'UTR chr1:1662649(-) A-I      3'UTR chr1:1662651(-) A-I      3'UTR chr1:1664442(-) A-I      intronic chr1:1664458(-) A-I      intronic chr1:1662676(-) A-I      3'UTR chr1:1662759(-) A-I      3'UTR chr1:1662782(-) A-I      3'UTR chr1:1662816(-) A-I      3'UTR chr1:1665892(-) A-I      intronic chr1:1665871(-) A-I      intronic chr1:1662668(-) A-I      3'UTR chr1:1662658(-) A-I      3'UTR chr1:1657530(-) A-I      intronic chr1:1662635(-) A-I      3'UTR chr1:1672335(-) A-I      intronic chr1:1662611(-) A-I      3'UTR chr1:1662603(-) A-I      3'UTR chr1:1662473(-) A-I      3'UTR chr1:1662377(-) A-I      3'UTR chr1:1661484(-) A-I      3'UTR chr1:1661481(-) A-I      3'UTR chr1:1672388(-) A-I      intronic chr1:1661471(-) A-I      3'UTR chr1:1663679(-) A-I      3'UTR chr1:1667664(-) A-I      intronic chr1:1661466(-) A-I      3'UTR chr1:1661459(-) A-I      3'UTR chr1:1661424(-) A-I      3'UTR chr1:1663600(-) A-I      3'UTR chr1:1657892(-) A-I      intronic chr1:1661408(-) A-I      3'UTR chr1:1661091(-) A-I      3'UTR chr1:1661085(-) A-I      3'UTR chr1:1661038(-) A-I      3'UTR chr1:1660997(-) A-I      3'UTR chr1:1660996(-) A-I      3'UTR chr1:1660995(-) A-I      3'UTR chr1:1667693(-) A-I      intronic chr1:1660984(-) A-I      3'UTR chr1:1658420(-) A-I      intronic chr1:1660973(-) A-I      3'UTR chr1:1660952(-) A-I      3'UTR chr1:1660941(-) A-I      3'UTR chr1:1667694(-) A-I      intronic chr1:1660935(-) A-I      3'UTR chr1:1667815(-) A-I      intronic chr1:1660931(-) A-I      3'UTR chr1:1660892(-) A-I      3'UTR chr1:1672416(-) A-I      intronic chr1:1660885(-) A-I      3'UTR chr1:1660872(-) A-I      3'UTR chr1:1595618(-) A-I      3'UTR chr1:1657573(-) A-I      intronic chr1:1667825(-) A-I      intronic chr1:1595565(-) A-I      3'UTR chr1:1672511(-) A-I      intronic chr1:1667874(-) A-I      intronic chr1:1663544(-) A-I      3'UTR chr1:1663428(-) A-I      3'UTR chr1:1666739(-) A-I      intronic chr1:1662818(-) A-I      3'UTR chr1:1662798(-) A-I      3'UTR chr1:1673348(-) A-I      intronic chr1:1673363(-) A-I      intronic chr1:1662792(-) A-I      3'UTR chr1:1662734(-) A-I      3'UTR chr1:1664439(-) A-I      intronic chr1:1664481(-) A-I      intronic chr1:1664511(-) A-I      intronic chr1:1664516(-) A-I      intronic chr1:1664563(-) A-I      intronic chr1:1664582(-) A-I      intronic chr1:1673710(-) A-I      intronic chr1:1664700(-) A-I      intronic chr1:1664714(-) A-I      intronic chr1:1664725(-) A-I      intronic chr1:1664754(-) A-I      intronic chr1:1664760(-) A-I      intronic chr1:1664809(-) A-I      intronic chr1:1671858(-) A-I      intronic chr1:1662716(-) A-I      3'UTR chr1:1674655(-) A-I      intronic chr1:1664854(-) A-I      intronic chr1:1664860(-) A-I      intronic chr1:1671885(-) A-I      intronic chr1:1664962(-) A-I      intronic chr1:1665037(-) A-I      intronic chr1:1665158(-) A-I      intronic chr1:1665180(-) A-I      intronic chr1:1665183(-) A-I      intronic chr1:1672147(-) A-I      intronic chr1:1672152(-) A-I      intronic chr1:1662697(-) A-I      3'UTR chr1:1665733(-) A-I      intronic chr1:1665738(-) A-I      intronic chr1:1665792(-) A-I      intronic chr1:1665793(-) A-I      intronic chr1:1665799(-) A-I      intronic chr1:1672187(-) A-I      intronic chr1:1672188(-) A-I      intronic chr1:1665808(-) A-I      intronic chr1:1665828(-) A-I      intronic chr1:1665843(-) A-I      intronic chr1:1662692(-) A-I      3'UTR chr1:1665850(-) A-I      intronic chr1:1665856(-) A-I      intronic chr1:1665873(-) A-I      intronic chr1:1665905(-) A-I      intronic chr1:1666621(-) A-I      intronic chr1:1666734(-) A-I      intronic chr1:1662678(-) A-I      3'UTR chr1:1666750(-) A-I      intronic chr1:1662672(-) A-I      3'UTR chr1:1658438(-) A-I      intronic chr1:1658528(-) A-I      intronic chr1:1665874(-) A-I      intronic chr1:1665109(-) A-I      intronic chr1:1595077(-) A-I      3'UTR chr1:1661036(-) A-I      3'UTR chr1:1663573(-) A-I      3'UTR chr1:1661047(-) A-I      3'UTR chr1:1595074(-) A-I      3'UTR chr1:1664834(-) A-I      intronic chr1:1673758(-) A-I      intronic chr1:1672362(-) A-I      intronic chr1:1594940(-) A-I      3'UTR chr1:1672450(-) A-I      intronic chr1:1660855(-) A-I      3'UTR chr1:1664855(-) A-I      intronic chr1:1660858(-) A-I      3'UTR chr1:1661013(-) A-I      3'UTR chr1:1595042(-) A-I      3'UTR chr1:1595498(-) A-I      3'UTR chr1:1665029(-) A-I      intronic chr1:1660917(-) A-I      3'UTR chr1:1595145(-) A-I      3'UTR chr1:1595522(-) A-I      3'UTR chr1:1672424(-) A-I      intronic chr1:1595553(-) A-I      3'UTR chr1:1595047(-) A-I      3'UTR chr1:1595527(-) A-I      3'UTR chr1:1595540(-) A-I      3'UTR chr1:1661404(-) A-I      3'UTR chr1:1660958(-) A-I      3'UTR chr1:1664515(-) A-I      intronic chr1:1595137(-) A-I      3'UTR chr1:1594978(-) A-I      3'UTR chr1:1594962(-) A-I      3'UTR chr1:1662793(-) A-I      3'UTR chr1:1661492(-) A-I      3'UTR chr1:1667521(-) A-I      intronic chr1:1665099(-) A-I      intronic chr1:1663570(-) A-I      3'UTR chr1:1664539(-) A-I      intronic chr1:1664835(-) A-I      intronic chr1:1595113(-) A-I      3'UTR chr1:1660957(-) A-I      3'UTR chr1:1672426(-) A-I      intronic chr1:1668119(-) A-I      intronic chr1:1662627(-) A-I      3'UTR chr1:1595034(-) A-I      3'UTR chr1:1663440(-) A-I      3'UTR chr1:1595006(-) A-I      3'UTR chr1:1665858(-) A-I      intronic chr1:1662754(-) A-I      3'UTR chr1:1672402(-) A-I      intronic chr1:1660944(-) A-I      3'UTR chr1:1660916(-) A-I      3'UTR chr1:1660991(-) A-I      3'UTR chr1:1672361(-) A-I      intronic chr1:1664912(-) A-I      intronic chr1:1664501(-) A-I      intronic chr1:1661090(-) A-I      3'UTR chr1:1673812(-) A-I      intronic chr1:1664578(-) A-I      intronic chr1:1672217(-) A-I      intronic chr1:1595385(-) A-I      3'UTR chr1:1662764(-) A-I      3'UTR chr1:1595063(-) A-I      3'UTR chr1:1672495(-) A-I      intronic chr1:1671939(-) A-I      intronic chr1:1662610(-) A-I      3'UTR chr1:1663582(-) A-I      3'UTR chr1:1595560(-) A-I      3'UTR chr1:1661053(-) A-I      3'UTR chr1:1663634(-) A-I      3'UTR chr1:1667480(-) A-I      intronic chr1:1662640(-) A-I      3'UTR chr1:1661023(-) A-I      3'UTR chr1:1661052(-) A-I      3'UTR chr1:1662652(-) A-I      3'UTR chr1:1595586(-) A-I      3'UTR chr1:1665882(-) A-I      intronic chr1:1663222(-) A-I      3'UTR chr1:1663599(-) A-I      3'UTR chr1:1674762(-) A-I      intronic chr1:1594982(-) A-I      3'UTR chr1:1663453(-) A-I      3'UTR chr1:1661024(-) A-I      3'UTR chr1:1663407(-) A-I      3'UTR chr1:1594945(-) A-I      3'UTR chr1:1660044(-) A-I      3'UTR chr1:1663629(-) A-I      3'UTR chr1:1662733(-) A-I      3'UTR chr1:1664475(-) A-I      intronic chr1:1660888(-) A-I      3'UTR chr1:1660850(-) A-I      3'UTR chr1:1595079(-) A-I      3'UTR chr1:1665834(-) A-I      intronic chr1:1662707(-) A-I      3'UTR chr1:1668077(-) A-I      intronic chr1:1660999(-) A-I      3'UTR chr1:1594986(-) A-I      3'UTR chr1:1595180(-) A-I      3'UTR chr1:1595025(-) A-I      3'UTR chr1:1673791(-) A-I      intronic chr1:1671925(-) A-I      intronic chr1:1662729(-) A-I      3'UTR chr1:1594975(-) A-I      3'UTR chr1:1595175(-) A-I      3'UTR chr1:1661104(-) A-I      3'UTR chr1:1672218(-) A-I      intronic chr1:1665859(-) A-I      intronic chr1:1664915(-) A-I      intronic chr1:1665169(-) A-I      intronic chr1:1664434(-) A-I      intronic chr1:1664817(-) A-I      intronic chr1:1595021(-) A-I      3'UTR chr1:1667890(-) A-I      intronic chr1:1595500(-) A-I      3'UTR chr1:1663268(-) A-I      3'UTR chr1:1673726(-) A-I      intronic chr1:1672226(-) A-I      intronic chr1:1665051(-) A-I      intronic chr1:1595514(-) A-I      3'UTR chr1:1667748(-) A-I      intronic chr1:1665232(-) A-I      intronic chr1:1664914(-) A-I      intronic chr1:1671932(-) A-I      intronic chr1:1659355(-) A-I      3'UTR chr1:1665237(-) A-I      intronic chr1:1662708(-) A-I      3'UTR chr1:1660988(-) A-I      3'UTR chr1:1673814(-) A-I      intronic chr1:1660993(-) A-I      3'UTR chr1:1595539(-) A-I      3'UTR chr1:1663675(-) A-I      3'UTR chr1:1660990(-) A-I      3'UTR chr1:1663152(-) A-I      3'UTR chr1:1667773(-) A-I      intronic chr1:1661018(-) A-I      3'UTR chr1:1665097(-) A-I      intronic chr1:1660887(-) A-I      3'UTR chr1:1660948(-) A-I      3'UTR chr1:1672245(-) A-I      intronic chr1:1595462(-) A-I      3'UTR chr1:1662704(-) A-I      3'UTR chr1:1662547(-) A-I      3'UTR chr1:1673752(-) A-I      intronic chr1:1595584(-) A-I      3'UTR chr1:1594977(-) A-I      3'UTR chr1:1662623(-) A-I      3'UTR chr1:1662604(-) A-I      3'UTR chr1:1664793(-) A-I      intronic chr1:1664394(-) A-I      intronic chr1:1595031(-) A-I      3'UTR chr1:1595575(-) A-I      3'UTR chr1:1660989(-) A-I      3'UTR chr1:1663560(-) A-I      3'UTR chr1:1660857(-) A-I      3'UTR chr1:1665054(-) A-I      intronic chr1:1594999(-) A-I      3'UTR chr1:1664497(-) A-I      intronic chr1:1661099(-) A-I      3'UTR chr1:1595048(-) A-I      3'UTR chr1:1595007(-) A-I      3'UTR chr1:1662688(-) A-I      3'UTR chr1:1664795(-) A-I      intronic chr1:1662694(-) A-I      3'UTR chr1:1661410(-) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	SLC35E2B	chr1:1594977(-) A-I exon 3'UTR    15258596 chr1:1595006(-) A-I exon 3'UTR    15258596 chr1:1595074(-) A-I exon 3'UTR    15258596 chr1:1595079(-) A-I exon 3'UTR    15258596 chr1:1595385(-) A-I exon 3'UTR    15258596 chr1:1595586(-) A-I exon 3'UTR    15258596

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SLC35E2B	chr1:1593845-1593846(-) m6A 3'UTR//intron       27773535 chr1:1593981-1593982(-) m6A 3'UTR//intron       24284625//24981863//27773535//22608085 chr1:1593987-1593988(-) m6A 3'UTR//intron       24284625//24981863//22608085 chr1:1593995-1593996(-) m6A 3'UTR//intron       24284625//24981863//22608085 chr1:1594008-1594009(-) m6A 3'UTR//intron       24284625//24981863//22608085 chr1:1594068-1594069(-) m6A 3'UTR//intron       24284625//22608085 chr1:1594172-1594173(-) m6A 3'UTR//intron       27773535 chr1:1594243-1594244(-) m6A 3'UTR//intron       24284625//27773535 chr1:1594251-1594252(-) m6A 3'UTR//intron       24284625//27773535 chr1:1594256-1594257(-) m6A 3'UTR//intron       24284625//27773535 chr1:1594321-1594322(-) m6A 3'UTR//intron       27773535 chr1:1594345-1594346(-) m6A 3'UTR//intron       27773535 chr1:1594401-1594402(-) m6A 3'UTR//intron       27773535 chr1:1594439-1594440(-) m6A 3'UTR//intron       27773535 chr1:1594673-1594674(-) m6A 3'UTR//intron       24284625//24981863//22608085 chr1:1594680-1594681(-) m6A 3'UTR//intron       24284625//24981863//22608085 chr1:1594867-1594868(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr1:1594922-1594923(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr1:1595005-1595006(-) m6A 3'UTR//intron       24209618//24981863//27773535//22608085 chr1:1595102-1595103(-) m6A 3'UTR//intron       24209618//24981863//27773535 chr1:1595125-1595126(-) m6A 3'UTR//intron       24981863//27773535 chr1:1595205-1595206(-) m6A 3'UTR//intron       24981863//27773535 chr1:1595216-1595217(-) m6A 3'UTR//intron       24981863//27773535 chr1:1595308-1595309(-) m6A 3'UTR//exon//intron       27773535 chr1:1595330-1595331(-) m6A 3'UTR//exon//intron       27773535 chr1:1595668-1595669(-) m6A 3'UTR//exon//intron       24981863 chr1:1595730-1595731(-) m6A 3'UTR//exon//intron       24981863//27773535 chr1:1596374-1596375(-) m6A 3'UTR//exon//intron       24284625//24981863 chr1:1596430-1596431(-) m6A 3'UTR//exon//intron       24284625//24981863 chr1:1596651-1596652(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr1:1596690-1596691(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr1:1596741-1596742(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr1:1596786-1596787(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr1:1596797-1596798(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr1:1596965-1596966(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr1:1597013-1597014(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr1:1597018-1597019(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr1:1597054-1597055(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr1:1597060-1597061(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr1:1597070-1597071(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr1:1597124-1597125(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr1:1597239-1597240(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085 chr1:1597439-1597440(-) m6A CDS//exon//intron       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SLC35E2B	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hsv1-miR-H4-5p	Topotecan       60700

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H4-5p
Interactor2: SLC35E2B

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg