Basic Information:

  VIRBase ID:  

VHID00089069

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H4-5p:  MIMAT0008401          SHISA2:  NM_001007538     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H4-5p	SHISA2
miRBase Accession/Entrez ID	MIMAT0008401	387914
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	bA398O19.2//C13orf13//hShisa//PRO28631//TMEM46//WGAR9166

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SHISA2	chr13:26620345-26620346(-) m6A 3'UTR       24981863//22608085 chr13:26620447-26620448(-) m6A 3'UTR       24981863//22608085 chr13:26620510-26620511(-) m6A 3'UTR       25456834//24981863//22608085 chr13:26620521-26620522(-) m6A 3'UTR       25456834//24981863//22608085 chr13:26620680-26620681(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22608085 chr13:26620855-26620856(-) m6A CDS       24284625//25456834//24981863//27371828//22608085 chr13:26620897-26620898(-) m6A CDS       24284625//25456834//24981863//27371828//22608085 chr13:26620904-26620905(-) m6A CDS       24284625//25456834//24981863//27371828//22608085 chr13:26620928-26620929(-) m6A CDS       24284625//25456834//24981863//27371828//22608085 chr13:26621051-26621052(-) m6A CDS       24284625//22608085 chr13:26624862-26624863(-) m6A CDS       27773536 chr13:26625161-26625162(-) m6A 5'UTR       27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SHISA2	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hsv1-miR-H4-5p	Topotecan       60700

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H4-5p
Interactor2: SHISA2

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg