Detail Information

Basic Information:


  VIRBase ID:  

VHID00089048

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H4-5p:           ZBTB41:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H4-5p ZBTB41
miRBase
Accession/Entrez ID		 MIMAT0008401 360023
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - FRBZ1//ZNF924

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ZBTB41
chr1:197123073(-) A-I      3'UTR
chr1:197159283(-) A-I      intronic
chr1:197159246(-) A-I      intronic
chr1:197159244(-) A-I      intronic
chr1:197159233(-) A-I      intronic
chr1:197159230(-) A-I      intronic
chr1:197159227(-) A-I      intronic
chr1:197159278(-) A-I      intronic
chr1:197159226(-) A-I      intronic
chr1:197159264(-) A-I      intronic
chr1:197159247(-) A-I      intronic
chr1:197123071(-) A-I      3'UTR
chr1:197123072(-) A-I      3'UTR
chr1:197162405(-) A-I      intronic
chr1:197158574(-) A-I      intronic
chr1:197158573(-) A-I      intronic
chr1:197158534(-) A-I      intronic
chr1:197158373(-) A-I      intronic
chr1:197136485(-) A-I      intronic
chr1:197135920(-) A-I      intronic
chr1:197135914(-) A-I      intronic
chr1:197135877(-) A-I      intronic
chr1:197162409(-) A-I      intronic
chr1:197162475(-) A-I      intronic
chr1:197136423(-) A-I      intronic
chr1:197136457(-) A-I      intronic
chr1:197154147(-) A-I      intronic
chr1:197136484(-) A-I      intronic
chr1:197136463(-) A-I      intronic
chr1:197135794(-) A-I      intronic
chr1:197135938(-) A-I      intronic
chr1:197135894(-) A-I      intronic
chr1:197136402(-) A-I      intronic
chr1:197135865(-) A-I      intronic
chr1:197136544(-) A-I      intronic
chr1:197136597(-) A-I      intronic
chr1:197136489(-) A-I      intronic
chr1:197135855(-) A-I      intronic
chr1:197135936(-) A-I      intronic
chr1:197162464(-) A-I      intronic
chr1:197136738(-) A-I      intronic
chr1:197133799(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ZBTB41
chr1:197135894(-) A-G intron -    22484847
chr1:197135936(-) A-G intron -    22484847
chr1:197162464(-) A-G intron -    22484847
chr1:197162475(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ZBTB41
chr1:197126059-197126060(-) m6A 3'UTR       24981863
chr1:197126107-197126108(-) m6A 3'UTR       24981863
chr1:197127758-197127759(-) m6A 3'UTR//exon       24981863//22608085
chr1:197127786-197127787(-) m6A 3'UTR//exon       24981863//22608085
chr1:197127852-197127853(-) m6A 3'UTR//exon       24981863//22608085
chr1:197127913-197127914(-) m6A 3'UTR//exon       24981863//22608085
chr1:197128315-197128316(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr1:197128329-197128330(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr1:197128351-197128352(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr1:197128370-197128371(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr1:197128477-197128478(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22608085
chr1:197128553-197128554(-) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085
chr1:197128569-197128570(-) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085
chr1:197128590-197128591(-) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085
chr1:197128861-197128862(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr1:197128872-197128873(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr1:197128877-197128878(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr1:197128883-197128884(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr1:197128932-197128933(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr1:197129008-197129009(-) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085
chr1:197129079-197129080(-) m6A CDS//exon       24284625//24981863//27773535//22608085
chr1:197129090-197129091(-) m6A CDS//exon       24284625//24981863//27773535//22608085
chr1:197129136-197129137(-) m6A CDS//exon       24981863//22608085
chr1:197168498-197168499(-) m6A CDS//exon       24981863
chr1:197168539-197168540(-) m6A CDS//exon       24981863//27773535//22608085
chr1:197168601-197168602(-) m6A CDS//exon       24981863//27773535//22608085
chr1:197168637-197168638(-) m6A CDS//exon       24981863//27773535//22608085
chr1:197168713-197168714(-) m6A CDS//exon       24981863//27773535//22608085
chr1:197168770-197168771(-) m6A CDS//exon       24981863//27773535//22608085
chr1:197168793-197168794(-) m6A CDS//exon       24981863//27773535//22608085
chr1:197168889-197168890(-) m6A CDS//exon       24981863//22608085
chr1:197168918-197168919(-) m6A CDS//exon       24981863//22608085
chr1:197168961-197168962(-) m6A CDS//exon       24981863//22608085
chr1:197168997-197168998(-) m6A CDS//exon       24981863//22608085
chr1:197169020-197169021(-) m6A CDS//exon       24981863//22608085
chr1:197169106-197169107(-) m6A CDS//exon       24981863//22608085
chr1:197169444-197169445(-) m6A CDS//exon       22608085
chr1:197169477-197169478(-) m6A CDS//exon       22608085
chr1:197169642-197169643(-) m6A 5'UTR//exon       22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ZBTB41
Chromatin K562 cells     -
Cytosol K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus K562 cells     -
Ribosome Colon cancer cells     24393600

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug hsv1-miR-H4-5p
Topotecan       60700

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H4-5p
Interactor2: ZBTB41

Evidence Support:


Prediction-Evidence miRanda//PITA//Targetscan
Support Database VmiReg

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