Basic Information:

  VIRBase ID:  

VHID00088838

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H4-5p:  MIMAT0008401          MOB3C:  NM_201403     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H4-5p	MOB3C
miRBase Accession/Entrez ID	MIMAT0008401	148932
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MOB1E//MOBKL2C

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MOB3C	chr1:47076167(-) A-I      intronic chr1:47076153(-) A-I      intronic chr1:47076152(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MOB3C	chr1:47073615-47073616(-) m6A 3'UTR       - chr1:47073653-47073654(-) m6A 3'UTR       - chr1:47073801-47073802(-) m6A 3'UTR       24284625//24981863//27773535 chr1:47073813-47073814(-) m6A 3'UTR       24284625//24981863//27773535//27371828 chr1:47073882-47073883(-) m6A 3'UTR       25456834//24981863//27773535//27371828 chr1:47073925-47073926(-) m6A 3'UTR       25456834//24981863//27773535//27371828 chr1:47073953-47073954(-) m6A 3'UTR       25456834//24981863//27773535//27371828 chr1:47073999-47074000(-) m6A 3'UTR       24981863//27773535//27371828 chr1:47074059-47074060(-) m6A 3'UTR       27773535//27371828 chr1:47074071-47074072(-) m6A 3'UTR       27773535//27371828 chr1:47074087-47074088(-) m6A 3'UTR       27773535//27371828 chr1:47074147-47074148(-) m6A 3'UTR       24284625//24981863//27773535//27371828 chr1:47074256-47074257(-) m6A 3'UTR       24284625//24981863//27773535 chr1:47074310-47074311(-) m6A 3'UTR       24284625//24981863//27773535 chr1:47074323-47074324(-) m6A 3'UTR       24284625//24981863 chr1:47074385-47074386(-) m6A 3'UTR       24284625//24981863 chr1:47075096-47075097(-) m6A 3'UTR       27773535//27371828 chr1:47075117-47075118(-) m6A 3'UTR       27773535//27371828 chr1:47075197-47075198(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828 chr1:47075260-47075261(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr1:47075283-47075284(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22575960//22608085 chr1:47075313-47075314(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22575960//22608085 chr1:47075695-47075696(-) m6A CDS//exon       24284625//25456834//24981863//27371828//22608085 chr1:47075857-47075858(-) m6A CDS//exon       24284625//27773535 chr1:47078625-47078626(-) m6A CDS//exon       24284625//27371828 chr1:47078740-47078741(-) m6A CDS//exon       24209618//25456834//24981863//27371828//22575960 chr1:47078796-47078797(-) m6A CDS//exon       24209618//25456834//24981863//27371828//22575960 chr1:47078829-47078830(-) m6A CDS//exon       24284625//24209618//24981863//27371828//22575960 chr1:47078865-47078866(-) m6A CDS//exon       24284625//27371828 chr1:47078958-47078959(-) m6A CDS//exon       24284625//25456834//27371828//27773536 chr1:47079017-47079018(-) m6A 5'UTR//CDS//exon       24284625//25456834//27371828//27773536 chr1:47079175-47079176(-) m6A 5'UTR//intron       25456834//27371828 chr1:47079190-47079191(-) m6A 5'UTR//intron       25456834//24981863//27371828 chr1:47079224-47079225(-) m6A 5'UTR//intron       25456834//24981863 chr1:47079247-47079248(-) m6A 5'UTR//intron       25456834//24981863 chr1:47079265-47079266(-) m6A 5'UTR//intron       25456834//24981863 chr1:47079516-47079517(-) m6A 5'UTR//intron       25456834 chr1:47079573-47079574(-) m6A 5'UTR//intron       - chr1:47080566-47080567(-) m6A 5'UTR//intron       - chr1:47080622-47080623(-) m6A 5'UTR//intron       - chr1:47080697-47080698(-) m6A 5'UTR//CDS//intron       - chr1:47080717-47080718(-) m6A 5'UTR//CDS//intron       - chr1:47080896-47080897(-) m6A 5'UTR//intron       - chr1:47080948-47080949(-) m1A 5'UTR//intron       26863196 chr1:47080993-47080994(-) m6A 5'UTR//intron       27773535 chr1:47081117-47081118(-) m6A 5'UTR//intron       - chr1:47082385-47082386(-) m6A 5'UTR//exon       24209618//25456834//24981863 chr1:47082442-47082443(-) m6A 5'UTR//exon       24209618//25456834//24981863//27371828 chr1:47082456-47082457(-) m6A 5'UTR//exon       24209618//25456834//24981863//27371828 chr1:47082476-47082477(-) m6A 5'UTR//exon       24209618//25456834//24981863//27371828 chr1:47082488-47082489(-) m6A 5'UTR//exon       24209618//25456834//24981863//27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MOB3C	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hsv1-miR-H4-5p	Topotecan       60700

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H4-5p
Interactor2: MOB3C

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg