Basic Information:

  VIRBase ID:  

VHID00088463

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H4-5p:  MIMAT0008401          HDAC11:  NM_001330636     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H4-5p	HDAC11
miRBase Accession/Entrez ID	MIMAT0008401	79885
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HD11

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	HDAC11	chr3:13525595(+) A-I      intronic chr3:13527234(+) A-I      intronic chr3:13524164(+) A-I      intronic chr3:13524166(+) A-I      intronic chr3:13524202(+) A-I      intronic chr3:13525674(+) A-I      intronic chr3:13524028(+) A-I      intronic chr3:13534050(+) A-I      intronic chr3:13534225(+) A-I      intronic chr3:13527210(+) A-I      intronic chr3:13527173(+) A-I      intronic chr3:13540943(+) A-I      intronic chr3:13527220(+) A-I      intronic chr3:13524068(+) A-I      intronic chr3:13528178(+) A-I      intronic chr3:13527607(+) A-I      intronic chr3:13525538(+) A-I      intronic chr3:13524049(+) A-I      intronic chr3:13527167(+) A-I      intronic chr3:13527606(+) A-I      intronic chr3:13528211(+) A-I      intronic chr3:13527553(+) A-I      intronic chr3:13527548(+) A-I      intronic chr3:13528148(+) A-I      intronic chr3:13527646(+) A-I      intronic chr3:13527603(+) A-I      intronic chr3:13526107(+) A-I      intronic chr3:13525601(+) A-I      intronic chr3:13524347(+) A-I      intronic chr3:13525478(+) A-I      intronic chr3:13524027(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	HDAC11	chr3:13545665-13545666(+) m6A 3'UTR//CDS       24209618 chr3:13545740-13545741(+) m6A 3'UTR//CDS       24209618 chr3:13546145-13546146(+) m6A 3'UTR//CDS       24284625//24981863 chr3:13546151-13546152(+) m6A 3'UTR//CDS       24284625//24981863 chr3:13547021-13547022(+) m1A 3'UTR       26863196 chr3:13547102-13547103(+) m6A 3'UTR       24209618 chr3:13547120-13547121(+) m6A 3'UTR       24209618 chr3:13547126-13547127(+) m6A 3'UTR       24209618 chr3:13547199-13547200(+) m6A 3'UTR       24209618 chr3:13547231-13547232(+) m6A 3'UTR       24209618 chr3:13547308-13547309(+) m6A 3'UTR       24209618

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	HDAC11	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus K562 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hsv1-miR-H4-5p	Topotecan       60700

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H4-5p
Interactor2: HDAC11

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg