Basic Information:

  VIRBase ID:  

VHID00088144

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H4-5p:  MIMAT0008401          PID1:  NM_001330156     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H4-5p	PID1
miRBase Accession/Entrez ID	MIMAT0008401	55022
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HMFN2073//NYGGF4//P-CLI1//PCLI1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PID1	chr2:229772156(-) A-I      intronic chr2:229772158(-) A-I      intronic chr2:229773477(-) A-I      intronic chr2:229772159(-) A-I      intronic chr2:229772163(-) A-I      intronic chr2:229884007(-) A-I      intronic chr2:229884006(-) A-I      intronic chr2:229883998(-) A-I      intronic chr2:229883976(-) A-I      intronic chr2:229883975(-) A-I      intronic chr2:229883974(-) A-I      intronic chr2:229773475(-) A-I      intronic chr2:229774056(-) A-I      intronic chr2:229773474(-) A-I      intronic chr2:229774053(-) A-I      intronic chr2:229774052(-) A-I      intronic chr2:229773458(-) A-I      intronic chr2:229773497(-) A-I      intronic chr2:229774028(-) A-I      intronic chr2:229774025(-) A-I      intronic chr2:229773603(-) A-I      intronic chr2:229773597(-) A-I      intronic chr2:229773593(-) A-I      intronic chr2:229773578(-) A-I      intronic chr2:229773456(-) A-I      intronic chr2:229773441(-) A-I      intronic chr2:229773436(-) A-I      intronic chr2:229773424(-) A-I      intronic chr2:229773051(-) A-I      intronic chr2:229773038(-) A-I      intronic chr2:229773037(-) A-I      intronic chr2:229773006(-) A-I      intronic chr2:229772196(-) A-I      intronic chr2:229772185(-) A-I      intronic chr2:229884016(-) A-I      intronic chr2:229772184(-) A-I      intronic chr2:229884015(-) A-I      intronic chr2:229772168(-) A-I      intronic chr2:229996115(-) A-I      intronic chr2:229996120(-) A-I      intronic chr2:229996107(-) A-I      intronic chr2:229996058(-) A-I      intronic chr2:229996052(-) A-I      intronic chr2:229884008(-) A-I      intronic chr2:229996111(-) A-I      intronic chr2:229773522(-) A-I      intronic chr2:229773519(-) A-I      intronic chr2:229773517(-) A-I      intronic chr2:229996043(-) A-I      intronic chr2:229996075(-) A-I      intronic chr2:229996062(-) A-I      intronic chr2:229996050(-) A-I      intronic chr2:229996023(-) A-I      intronic chr2:229996007(-) A-I      intronic chr2:229958010(-) A-I      intronic chr2:229771436(-) A-I      intronic chr2:230020118(-) A-I      intronic chr2:229771439(-) A-I      intronic chr2:230094346(-) A-I      intronic chr2:229772663(-) A-I      intronic chr2:229772606(-) A-I      intronic chr2:229772444(-) A-I      intronic chr2:229772419(-) A-I      intronic chr2:229771606(-) A-I      intronic chr2:229771604(-) A-I      intronic chr2:229879078(-) A-I      intronic chr2:230016454(-) A-I      intronic chr2:229772432(-) A-I      intronic chr2:230016463(-) A-I      intronic chr2:229937140(-) A-I      intronic chr2:229772541(-) A-I      intronic chr2:229968498(-) A-I      intronic chr2:229880194(-) A-I      intronic chr2:229841678(-) A-I      intronic chr2:229808210(-) A-I      intronic chr2:229772683(-) A-I      intronic chr2:229840844(-) A-I      intronic chr2:230016458(-) A-I      intronic chr2:229772658(-) A-I      intronic chr2:229970708(-) A-I      intronic chr2:229977460(-) A-I      intronic chr2:229996019(-) A-I      intronic chr2:229937137(-) A-I      intronic chr2:229970787(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PID1	chr2:230016454(-) A-I intron -    15342557 chr2:230016458(-) A-I intron -    15342557 chr2:230016463(-) A-I intron -    15342557 chr2:230016520(-) A-I intron -    15342557 chr2:230016558(-) A-I intron -    15342557 chr2:230016601(-) A-I intron -    15342557 chr2:230053311(-) G-A intron -    22484847 chr2:230053312(-) T-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PID1	chr2:229889343-229889344(-) m6A 3'UTR//intron       27773535 chr2:229889465-229889466(-) m6A 3'UTR//intron       24981863//27773535 chr2:229889521-229889522(-) m6A 3'UTR//intron       24981863//27773535 chr2:229889539-229889540(-) m6A 3'UTR//intron       24981863//27773535 chr2:229889547-229889548(-) m6A 3'UTR//intron       24981863//27773535 chr2:229889568-229889569(-) m6A 3'UTR//intron       24981863//27773535 chr2:229889585-229889586(-) m6A 3'UTR//intron       24981863//27773535 chr2:229890160-229890161(-) m6A 3'UTR//intron       24209618//24981863//27773535 chr2:229890247-229890248(-) m6A 3'UTR//intron       24209618//25456834//24981863//27773535 chr2:229890255-229890256(-) m6A 3'UTR//intron       24209618//25456834//24981863//27773535 chr2:229890342-229890343(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22575960 chr2:229890436-229890437(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535 chr2:229890470-229890471(-) m6A CDS//intron       24209618//25456834//24981863//27773535 chr2:229890513-229890514(-) m6A CDS//intron       24209618//25456834//24981863//27773535//27371828 chr2:230020550-230020551(-) m6A 3'UTR//CDS//exon//intron       - chr2:230020556-230020557(-) m6A 3'UTR//CDS//exon//intron       - chr2:230045624-230045625(-) Cm intron       16381836 chr2:230045723-230045724(-) Y intron       26075521

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PID1	Exosome Blood     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hsv1-miR-H4-5p	Topotecan       60700

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H4-5p
Interactor2: PID1

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg