Basic Information:

  VIRBase ID:  

VHID00088101

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H4-5p:  MIMAT0008401          HES2:  NM_019089     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H4-5p	HES2
miRBase Accession/Entrez ID	MIMAT0008401	54626
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	bHLHb40

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	HES2	chr1:6475995(-) A-I      3'UTR chr1:6475868(-) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	HES2	chr1:6477778(-) C-T exon 3'UTR    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	HES2	chr1:6475358-6475359(-) m6A 3'UTR//intron       24284625//24981863 chr1:6475385-6475386(-) m6A 3'UTR//intron       24284625//24981863 chr1:6475625-6475626(-) m6A 3'UTR//intron       24284625//24981863 chr1:6475636-6475637(-) m6A 3'UTR//intron       24284625//24981863 chr1:6475654-6475655(-) m6A 3'UTR//intron       24284625//24981863//22575960 chr1:6475731-6475732(-) m6A 3'UTR//intron       24284625//25456834//22575960 chr1:6475744-6475745(-) m6A 3'UTR//intron       24284625//25456834 chr1:6475778-6475779(-) m6A 3'UTR//intron       24284625 chr1:6475804-6475805(-) m6A 3'UTR//intron       24284625 chr1:6475836-6475837(-) m6A 3'UTR//intron       24284625 chr1:6475843-6475844(-) m6A 3'UTR//intron       24284625 chr1:6475851-6475852(-) m6A 3'UTR//intron       24284625 chr1:6475865-6475866(-) m6A 3'UTR//intron       - chr1:6476759-6476760(-) m6A 3'UTR//intron       24284625 chr1:6476787-6476788(-) m6A 3'UTR//intron       24284625 chr1:6476805-6476806(-) m6A 3'UTR//intron       24284625 chr1:6476828-6476829(-) m6A 3'UTR//intron       24284625 chr1:6476851-6476852(-) m6A 3'UTR//intron       24284625 chr1:6476987-6476988(-) m6A 3'UTR//intron       - chr1:6477057-6477058(-) m6A 3'UTR//intron       - chr1:6477079-6477080(-) m6A 3'UTR//intron       - chr1:6477102-6477103(-) m6A 3'UTR//intron       24284625 chr1:6478181-6478182(-) m6A 3'UTR//intron       24284625 chr1:6478471-6478472(-) m6A 3'UTR//intron       24284625 chr1:6478558-6478559(-) m6A 3'UTR//intron       24284625//25456834//27773536 chr1:6478576-6478577(-) m6A 3'UTR//intron       24284625//25456834//27773536 chr1:6478627-6478628(-) m6A 3'UTR//intron       24284625//25456834//27773536 chr1:6478632-6478633(-) m6A 3'UTR//intron       24284625//25456834//27773536 chr1:6478692-6478693(-) m6A 3'UTR//intron       24284625//25456834//24981863//27371828//22575960 chr1:6478776-6478777(-) m6A 3'UTR//intron       24284625//25456834//24981863//27371828//22575960//22608085 chr1:6478878-6478879(-) m6A 3'UTR//intron       24284625//25456834//24981863 chr1:6478893-6478894(-) m6A 3'UTR//intron       24284625//25456834//24981863 chr1:6478912-6478913(-) m6A 3'UTR//intron       24284625//24981863 chr1:6479933-6479934(-) m6A 5'UTR//intron       24981863 chr1:6479945-6479946(-) m6A 5'UTR//intron       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	HES2	Exosome Blood     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hsv1-miR-H4-5p	Topotecan       60700

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H4-5p
Interactor2: HES2

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg