Basic Information:

  VIRBase ID:  

VHID00087427

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H4-5p:  MIMAT0008401          NR2F1:  NM_005654     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H4-5p	NR2F1
miRBase Accession/Entrez ID	MIMAT0008401	7025
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BBOAS//BBSOAS//COUP-TFI//COUPTF1//EAR-3//EAR3//ERBAL3//SVP44//TCFCOUP1//TFCOUP1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NR2F1	chr5:92919096-92919097(+) m6A 5'UTR       24284625//24981863//27773535 chr5:92919224-92919225(+) m6A 5'UTR       24284625//27773535 chr5:92919371-92919372(+) m6A 5'UTR       24284625//24981863//27773535//22608085 chr5:92919428-92919429(+) m1A 5'UTR       26863196 chr5:92919437-92919438(+) m1A 5'UTR       26863196 chr5:92919628-92919629(+) m1A 5'UTR       26863196 chr5:92919750-92919751(+) m6A 5'UTR       24284625//24981863//22575960 chr5:92919863-92919864(+) m6A 5'UTR       22575960 chr5:92919932-92919933(+) m6A 5'UTR       - chr5:92920291-92920292(+) m1A 5'UTR       26863196//26863410 chr5:92920455-92920456(+) m6A 5'UTR       24284625//24981863//22608085 chr5:92920464-92920465(+) m6A 5'UTR       24284625//24981863//22608085 chr5:92920888-92920889(+) m6A CDS       24284625//22608085 chr5:92920934-92920935(+) m6A CDS       24284625//24981863//22575960//22608085 chr5:92921000-92921001(+) m6A CDS       24284625//24981863//22575960//22608085 chr5:92921078-92921079(+) m6A CDS       24284625//24981863//22575960//22608085 chr5:92921108-92921109(+) m6A CDS       24284625//24981863//22575960//22608085 chr5:92922901-92922902(+) m6A exon//intron       24284625 chr5:92923214-92923215(+) m6A exon//intron       24284625 chr5:92923688-92923689(+) m6A CDS//exon       24284625//22608085 chr5:92923811-92923812(+) m6A CDS//exon       24284625//24981863 chr5:92924048-92924049(+) m6A CDS//exon       24284625 chr5:92927703-92927704(+) m6A exon//intron       24284625 chr5:92927716-92927717(+) m6A exon//intron       24284625 chr5:92927744-92927745(+) m6A exon//intron       24284625 chr5:92927877-92927878(+) m6A exon//intron       24284625 chr5:92927886-92927887(+) m6A exon//intron       24284625 chr5:92929382-92929383(+) m6A CDS//exon       24284625//24981863//22575960 chr5:92929464-92929465(+) m6A CDS//exon       24284625//24209618//24981863//22575960//22608085 chr5:92929476-92929477(+) m6A CDS//exon       24284625//24209618//24981863//22575960//22608085 chr5:92929548-92929549(+) m6A 3'UTR//exon       24284625//24981863//27773536//22575960//22608085 chr5:92929585-92929586(+) m6A 3'UTR//exon       24284625//24981863//27773536//22575960//22608085 chr5:92929594-92929595(+) m6A 3'UTR//exon       24284625//24981863//27773536//22575960//22608085 chr5:92929611-92929612(+) m6A 3'UTR//exon       24284625//24981863//27773536//22575960//22608085 chr5:92929628-92929629(+) m6A 3'UTR//exon       24284625//24981863//27773536//22575960//22608085 chr5:92929682-92929683(+) m6A 3'UTR//exon       24284625//24981863//27773535//27773536//22575960//22608085 chr5:92929740-92929741(+) m6A 3'UTR//exon       24284625//24981863//27773535//27773536//22575960//22608085 chr5:92929782-92929783(+) m6A 3'UTR//exon       24284625//24981863//27773535//22575960//22608085 chr5:92929787-92929788(+) m6A 3'UTR//exon       24284625//24981863//27773535//22575960//22608085 chr5:92929803-92929804(+) m6A 3'UTR//exon       24284625//24981863//27773535//22575960//22608085 chr5:92929834-92929835(+) m6A 3'UTR//exon       24284625//24981863//27773535//22575960//22608085 chr5:92929835-92929836(+) Cm 3'UTR//exon       - chr5:92929851-92929852(+) m6A 3'UTR       24284625//24981863//27773535//22575960//22608085 chr5:92929871-92929872(+) m6A 3'UTR       24284625//24981863//27773535//22575960//22608085 chr5:92929881-92929882(+) m6A 3'UTR       24284625//24981863//27773535//22575960//22608085 chr5:92929889-92929890(+) m6A 3'UTR       24284625//24981863//27773535//22575960//22608085 chr5:92929937-92929938(+) m6A 3'UTR       24284625//24981863//26404942//27773535//22575960//22608085 chr5:92929956-92929957(+) m6A 3'UTR       24284625//24981863//26404942//27773535//22575960//22608085 chr5:92929974-92929975(+) m6A 3'UTR       24284625//24981863//26404942//27773535//22575960//22608085 chr5:92929989-92929990(+) m6A 3'UTR       24284625//24981863//26404942//27773535//22575960//22608085 chr5:92930047-92930048(+) m6A 3'UTR       24284625//24981863//27773535//22575960//22608085 chr5:92930075-92930076(+) m6A 3'UTR       24284625//24981863//27773535//22575960//22608085 chr5:92930172-92930173(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NR2F1	Exosome Blood     - Nucleus HeLa-S3 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hsv1-miR-H4-5p	Topotecan       60700

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H4-5p
Interactor2: NR2F1

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg