Basic Information:

  VIRBase ID:  

VHID00087361

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H4-5p:  MIMAT0008401          SLC1A7:  NR_109858     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H4-5p	SLC1A7
miRBase Accession/Entrez ID	MIMAT0008401	6512
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	AAAT//EAAT5

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SLC1A7	chr1:53584529(-) A-I      intronic chr1:53584521(-) A-I      intronic chr1:53584520(-) A-I      intronic chr1:53584547(-) A-I      intronic chr1:53584553(-) A-I      intronic chr1:53584558(-) A-I      intronic chr1:53584545(-) A-I      intronic chr1:53584569(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SLC1A7	chr1:53553274-53553275(-) m6A 3'UTR//exon       27773535 chr1:53553317-53553318(-) m6A 3'UTR//exon       27773535 chr1:53553349-53553350(-) m6A 3'UTR//exon       27773535 chr1:53553372-53553373(-) m6A 3'UTR//exon       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SLC1A7	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus HeLa-S3 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hsv1-miR-H4-5p	Topotecan       60700

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H4-5p
Interactor2: SLC1A7

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid
Support Database	VmiReg