Basic Information:

  VIRBase ID:  

VHID00087029

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H4-5p:  MIMAT0008401          GJB5:  NM_005268     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H4-5p	GJB5
miRBase Accession/Entrez ID	MIMAT0008401	2709
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CX31.1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	GJB5	chr1:35223265-35223266(+) m6A CDS       25456834//22575960 chr1:35223286-35223287(+) m6A CDS       25456834//22575960 chr1:35223318-35223319(+) m6A CDS       25456834//22575960 chr1:35223355-35223356(+) m6A CDS       25456834//22575960 chr1:35223451-35223452(+) m6A CDS       22575960 chr1:35223481-35223482(+) m6A CDS       22575960 chr1:35223715-35223716(+) m6A CDS       25456834 chr1:35223727-35223728(+) m6A CDS       25456834 chr1:35223741-35223742(+) m6A CDS       25456834 chr1:35223765-35223766(+) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	GJB5	Exosome Blood     - Ribosome Colon cancer cells     24393600

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hsv1-miR-H4-5p	Topotecan       60700

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H4-5p
Interactor2: GJB5

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg