Basic Information:

  VIRBase ID:  

VHID00086646

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H3-3p:  MIMAT0008400          NUDT19:  NM_001105570     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H3-3p	NUDT19
miRBase Accession/Entrez ID	MIMAT0008400	390916
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	RP2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NUDT19	chr19:33193446(+) A-I      intronic chr19:33191582(+) A-I      intronic chr19:33191617(+) A-I      intronic chr19:33193442(+) A-I      intronic chr19:33192366(+) A-I      intronic chr19:33192824(+) A-I      intronic chr19:33192873(+) A-I      intronic chr19:33204131(+) A-I      3'UTR chr19:33195902(+) A-I      intronic chr19:33192808(+) A-I      intronic chr19:33196166(+) A-I      intronic chr19:33196162(+) A-I      intronic chr19:33196128(+) A-I      intronic chr19:33195925(+) A-I      intronic chr19:33193463(+) A-I      intronic chr19:33191843(+) A-I      intronic chr19:33195886(+) A-I      intronic chr19:33195882(+) A-I      intronic chr19:33195866(+) A-I      intronic chr19:33193469(+) A-I      intronic chr19:33203004(+) A-I      3'UTR chr19:33193464(+) A-I      intronic chr19:33193459(+) A-I      intronic chr19:33195893(+) A-I      intronic chr19:33184410(+) A-I      intronic chr19:33196674(+) A-I      intronic chr19:33195780(+) A-I      intronic chr19:33195853(+) A-I      intronic chr19:33192163(+) A-I      intronic chr19:33192176(+) A-I      intronic chr19:33192192(+) A-I      intronic chr19:33192809(+) A-I      intronic chr19:33193426(+) A-I      intronic chr19:33193439(+) A-I      intronic chr19:33201679(+) A-I      intronic chr19:33201620(+) A-I      intronic chr19:33193452(+) A-I      intronic chr19:33196117(+) A-I      intronic chr19:33194388(+) A-I      intronic chr19:33194518(+) A-I      intronic chr19:33200650(+) A-I      intronic chr19:33196215(+) A-I      intronic chr19:33186189(+) A-I      intronic chr19:33186296(+) A-I      intronic chr19:33196125(+) A-I      intronic chr19:33196073(+) A-I      intronic chr19:33201391(+) A-I      intronic chr19:33201355(+) A-I      intronic chr19:33201018(+) A-I      intronic chr19:33201017(+) A-I      intronic chr19:33200660(+) A-I      intronic chr19:33200657(+) A-I      intronic chr19:33195857(+) A-I      intronic chr19:33197514(+) A-I      intronic chr19:33195854(+) A-I      intronic chr19:33196752(+) A-I      intronic chr19:33197459(+) A-I      intronic chr19:33196656(+) A-I      intronic chr19:33197342(+) A-I      intronic chr19:33186221(+) A-I      intronic chr19:33204166(+) A-I      3'UTR chr19:33204196(+) A-I      3'UTR chr19:33204086(+) A-I      3'UTR chr19:33204123(+) A-I      3'UTR chr19:33204136(+) A-I      3'UTR chr19:33204160(+) A-I      3'UTR chr19:33195957(+) A-I      intronic chr19:33201057(+) A-I      intronic chr19:33191714(+) A-I      intronic chr19:33191481(+) A-I      intronic chr19:33196126(+) A-I      intronic chr19:33196753(+) A-I      intronic chr19:33196771(+) A-I      intronic chr19:33191620(+) A-I      intronic chr19:33191733(+) A-I      intronic chr19:33192857(+) A-I      intronic chr19:33191766(+) A-I      intronic chr19:33192802(+) A-I      intronic chr19:33191598(+) A-I      intronic chr19:33191807(+) A-I      intronic chr19:33196767(+) A-I      intronic chr19:33192796(+) A-I      intronic chr19:33195751(+) A-I      intronic chr19:33192803(+) A-I      intronic chr19:33196207(+) A-I      intronic chr19:33191438(+) A-I      intronic chr19:33200821(+) A-I      intronic chr19:33196608(+) A-I      intronic chr19:33197478(+) A-I      intronic chr19:33196112(+) A-I      intronic chr19:33195919(+) A-I      intronic chr19:33191839(+) A-I      intronic chr19:33191453(+) A-I      intronic chr19:33196141(+) A-I      intronic chr19:33196691(+) A-I      intronic chr19:33191719(+) A-I      intronic chr19:33203425(+) A-I      3'UTR chr19:33192251(+) A-I      intronic chr19:33195915(+) A-I      intronic chr19:33195860(+) A-I      intronic chr19:33191780(+) A-I      intronic chr19:33196096(+) A-I      intronic chr19:33193509(+) A-I      intronic chr19:33198539(+) A-I      intronic chr19:33191488(+) A-I      intronic chr19:33195914(+) A-I      intronic chr19:33203438(+) A-I      3'UTR chr19:33196169(+) A-I      intronic chr19:33196590(+) A-I      intronic chr19:33191736(+) A-I      intronic chr19:33196109(+) A-I      intronic chr19:33196219(+) A-I      intronic chr19:33192212(+) A-I      intronic chr19:33191465(+) A-I      intronic chr19:33196150(+) A-I      intronic chr19:33196632(+) A-I      intronic chr19:33191848(+) A-I      intronic chr19:33196165(+) A-I      intronic chr19:33196765(+) A-I      intronic chr19:33191887(+) A-I      intronic chr19:33196168(+) A-I      intronic chr19:33204167(+) A-I      3'UTR chr19:33201614(+) A-I      intronic chr19:33195456(+) A-I      intronic chr19:33195788(+) A-I      intronic chr19:33186215(+) A-I      intronic chr19:33191898(+) A-I      intronic chr19:33191687(+) A-I      intronic chr19:33204120(+) A-I      3'UTR chr19:33196601(+) A-I      intronic chr19:33195757(+) A-I      intronic chr19:33194145(+) A-I      intronic chr19:33192875(+) A-I      intronic chr19:33192292(+) A-I      intronic chr19:33196287(+) A-I      intronic chr19:33192229(+) A-I      intronic chr19:33196239(+) A-I      intronic chr19:33196242(+) A-I      intronic chr19:33192186(+) A-I      intronic chr19:33197336(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	NUDT19	chr19:33191835(+) A-G intron -    22484847 chr19:33192186(+) A-G intron -    22484847 chr19:33192191(+) A-G intron -    22484847 chr19:33192796(+) A-G intron -    22484847 chr19:33192800(+) A-G intron -    22484847 chr19:33192803(+) A-G intron -    22484847 chr19:33195915(+) A-G intron -    22484847 chr19:33196636(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NUDT19	chr19:33183089-33183090(+) m6A CDS       24209618//24981863//27773536//22575960 chr19:33183199-33183200(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr19:33183298-33183299(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr19:33183386-33183387(+) m6A CDS       24284625//24209618//24981863//22575960 chr19:33200236-33200237(+) m6A CDS       24981863 chr19:33202684-33202685(+) m6A CDS       24284625//24981863//27773535//22608085 chr19:33202719-33202720(+) m6A CDS       24284625//24981863//27773535//22608085 chr19:33202817-33202818(+) m6A CDS       24284625//24981863//26404942//27773535//22575960//22608085 chr19:33202834-33202835(+) m6A CDS       24284625//24981863//26404942//27773535//22575960//22608085 chr19:33202939-33202940(+) m6A 3'UTR       24981863 chr19:33204385-33204386(+) m6A 3'UTR       27773535 chr19:33204404-33204405(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NUDT19	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol K562 cells     - Exosome Blood     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus HCC cell line (HepG2)     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H3-3p
Interactor2: NUDT19

Evidence Support:

Prediction-Evidence	cRep//miRanda
Support Database	RepTar//VmiReg