Detail Information

Basic Information:


  VIRBase ID:  

VHID00085886

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H3-3p:           EXOC3L2:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H3-3p EXOC3L2
miRBase
Accession/Entrez ID		 MIMAT0008400 90332
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - XTP7

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR EXOC3L2
chr19:45718393(-) A-I      intronic
chr19:45717901(-) A-I      intronic
chr19:45717896(-) A-I      intronic
chr19:45717887(-) A-I      intronic
chr19:45726480(-) A-I      intronic
chr19:45716131(-) A-I      3'UTR
chr19:45716130(-) A-I      3'UTR
chr19:45716122(-) A-I      3'UTR
chr19:45716101(-) A-I      3'UTR
chr19:45716085(-) A-I      3'UTR
chr19:45716077(-) A-I      3'UTR
chr19:45716040(-) A-I      3'UTR
chr19:45716030(-) A-I      3'UTR
chr19:45716024(-) A-I      3'UTR
chr19:45716009(-) A-I      3'UTR
chr19:45715937(-) A-I      3'UTR
chr19:45715890(-) A-I      3'UTR
chr19:45726697(-) A-I      intronic
chr19:45724695(-) A-I      intronic
chr19:45715899(-) A-I      3'UTR
chr19:45718248(-) A-I      intronic
chr19:45718251(-) A-I      intronic
chr19:45718685(-) A-I      intronic
chr19:45722558(-) A-I      intronic
chr19:45725626(-) A-I      intronic
chr19:45725641(-) A-I      intronic
chr19:45725982(-) A-I      intronic
chr19:45726661(-) A-I      intronic
chr19:45726752(-) A-I      intronic
chr19:45726761(-) A-I      intronic
chr19:45727206(-) A-I      intronic
chr19:45727208(-) A-I      intronic
chr19:45732136(-) A-I      intronic
chr19:45734092(-) A-I      intronic
chr19:45729810(-) A-I      intronic
chr19:45718230(-) A-I      intronic
chr19:45715981(-) A-I      3'UTR
chr19:45715896(-) A-I      3'UTR
chr19:45716124(-) A-I      3'UTR
chr19:45715895(-) A-I      3'UTR
chr19:45715985(-) A-I      3'UTR
chr19:45715894(-) A-I      3'UTR
chr19:45715891(-) A-I      3'UTR
chr19:45716057(-) A-I      3'UTR
chr19:45720316(-) A-I      intronic
chr19:45720408(-) A-I      intronic
chr19:45718304(-) A-I      intronic
chr19:45723612(-) A-I      intronic
chr19:45716034(-) A-I      3'UTR
chr19:45716017(-) A-I      3'UTR
chr19:45718321(-) A-I      intronic
chr19:45718169(-) A-I      intronic
chr19:45724845(-) A-I      intronic
chr19:45723477(-) A-I      intronic
chr19:45718397(-) A-I      intronic
chr19:45716153(-) A-I      3'UTR
chr19:45715929(-) A-I      3'UTR
chr19:45715991(-) A-I      3'UTR
chr19:45724677(-) A-I      intronic
chr19:45726668(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED EXOC3L2
chr19:45723468(-) T-C intron -    22484847
chr19:45723484(-) T-C intron -    22484847
chr19:45723485(-) T-C intron -    22484847

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate EXOC3L2
Chromatin K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H3-3p
Interactor2: EXOC3L2

Evidence Support:


Prediction-Evidence cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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