Detail Information

Basic Information:


  VIRBase ID:  

VHID00085627

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H3-3p:           OPA3:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H3-3p OPA3
miRBase
Accession/Entrez ID
MIMAT0008400 80207
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - MGA3

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR OPA3
chr19:46053307(-) A-I      3'UTR
chr19:46054435(-) A-I      3'UTR
chr19:46072521(-) A-I      intronic
chr19:46072560(-) A-I      intronic
chr19:46038690(-) A-I      intronic
chr19:46038702(-) A-I      intronic
chr19:46044898(-) A-I      intronic
chr19:46054438(-) A-I      3'UTR
chr19:46044899(-) A-I      intronic
chr19:46072500(-) A-I      intronic
chr19:46054475(-) A-I      3'UTR
chr19:46056103(-) A-I      3'UTR
chr19:46056109(-) A-I      3'UTR
chr19:46044915(-) A-I      intronic
chr19:46044947(-) A-I      intronic
chr19:46044955(-) A-I      intronic
chr19:46072495(-) A-I      intronic
chr19:46038687(-) A-I      intronic
chr19:46064469(-) A-I      intronic
chr19:46074045(-) A-I      intronic
chr19:46074038(-) A-I      intronic
chr19:46073893(-) A-I      intronic
chr19:46071359(-) A-I      intronic
chr19:46071533(-) A-I      intronic
chr19:46071540(-) A-I      intronic
chr19:46071544(-) A-I      intronic
chr19:46036124(-) A-I      intronic
chr19:46047989(-) A-I      intronic
chr19:46047726(-) A-I      intronic
chr19:46083752(-) A-I      intronic
chr19:46081963(-) A-I      intronic
chr19:46081961(-) A-I      intronic
chr19:46081903(-) A-I      intronic
chr19:46067175(-) A-I      intronic
chr19:46047674(-) A-I      intronic
chr19:46078586(-) A-I      intronic
chr19:46078621(-) A-I      intronic
chr19:46071545(-) A-I      intronic
chr19:46071630(-) A-I      intronic
chr19:46066978(-) A-I      intronic
chr19:46066697(-) A-I      intronic
chr19:46064552(-) A-I      intronic
chr19:46072496(-) A-I      intronic
chr19:46038123(-) A-I      intronic
chr19:46038727(-) A-I      intronic
chr19:46038730(-) A-I      intronic
chr19:46039032(-) A-I      intronic
chr19:46072499(-) A-I      intronic
chr19:46066689(-) A-I      intronic
chr19:46066688(-) A-I      intronic
chr19:46066683(-) A-I      intronic
chr19:46065007(-) A-I      intronic
chr19:46065077(-) A-I      intronic
chr19:46065423(-) A-I      intronic
chr19:46065553(-) A-I      intronic
chr19:46065730(-) A-I      intronic
chr19:46066680(-) A-I      intronic
chr19:46066672(-) A-I      intronic
chr19:46066651(-) A-I      intronic
chr19:46066645(-) A-I      intronic
chr19:46046202(-) A-I      intronic
chr19:46072512(-) A-I      intronic
chr19:46083716(-) A-I      intronic
chr19:46072554(-) A-I      intronic
chr19:46072593(-) A-I      intronic
chr19:46065781(-) A-I      intronic
chr19:46065825(-) A-I      intronic
chr19:46065830(-) A-I      intronic
chr19:46073845(-) A-I      intronic
chr19:46065835(-) A-I      intronic
chr19:46066542(-) A-I      intronic
chr19:46066550(-) A-I      intronic
chr19:46066582(-) A-I      intronic
chr19:46072617(-) A-I      intronic
chr19:46072634(-) A-I      intronic
chr19:46072657(-) A-I      intronic
chr19:46073696(-) A-I      intronic
chr19:46073697(-) A-I      intronic
chr19:46073706(-) A-I      intronic
chr19:46066621(-) A-I      intronic
chr19:46042658(-) A-I      intronic
chr19:46041383(-) A-I      intronic
chr19:46041230(-) A-I      intronic
chr19:46041002(-) A-I      intronic
chr19:46040976(-) A-I      intronic
chr19:46071642(-) A-I      intronic
chr19:46040653(-) A-I      intronic
chr19:46073756(-) A-I      intronic
chr19:46043711(-) A-I      intronic
chr19:46043719(-) A-I      intronic
chr19:46044039(-) A-I      intronic
chr19:46073761(-) A-I      intronic
chr19:46073837(-) A-I      intronic
chr19:46040430(-) A-I      intronic
chr19:46040424(-) A-I      intronic
chr19:46040420(-) A-I      intronic
chr19:46040377(-) A-I      intronic
chr19:46039088(-) A-I      intronic
chr19:46039174(-) A-I      intronic
chr19:46039730(-) A-I      intronic
chr19:46039762(-) A-I      intronic
chr19:46079545(-) A-I      intronic
chr19:46079429(-) A-I      intronic
chr19:46079419(-) A-I      intronic
chr19:46079311(-) A-I      intronic
chr19:46079002(-) A-I      intronic
chr19:46078925(-) A-I      intronic
chr19:46078638(-) A-I      intronic
chr19:46036255(-) A-I      intronic
chr19:46037948(-) A-I      intronic
chr19:46044719(-) A-I      intronic
chr19:46044729(-) A-I      intronic
chr19:46044761(-) A-I      intronic
chr19:46044951(-) A-I      intronic
chr19:46044963(-) A-I      intronic
chr19:46045074(-) A-I      intronic
chr19:46046028(-) A-I      intronic
chr19:46046043(-) A-I      intronic
chr19:46046060(-) A-I      intronic
chr19:46046184(-) A-I      intronic
chr19:46046201(-) A-I      intronic
chr19:46037953(-) A-I      intronic
chr19:46038002(-) A-I      intronic
chr19:46038023(-) A-I      intronic
chr19:46061410(-) A-I      intronic
chr19:46059179(-) A-I      intronic
chr19:46059098(-) A-I      intronic
chr19:46058173(-) A-I      intronic
chr19:46040649(-) A-I      intronic
chr19:46058116(-) A-I      intronic
chr19:46049251(-) A-I      intronic
chr19:46049205(-) A-I      intronic
chr19:46049199(-) A-I      intronic
chr19:46049191(-) A-I      intronic
chr19:46048732(-) A-I      intronic
chr19:46084005(-) A-I      intronic
chr19:46084015(-) A-I      intronic
chr19:46084103(-) A-I      intronic
chr19:46084130(-) A-I      intronic
chr19:46084131(-) A-I      intronic
chr19:46084146(-) A-I      intronic
chr19:46079609(-) A-I      intronic
chr19:46043372(-) A-I      intronic
chr19:46078414(-) A-I      intronic
chr19:46082083(-) A-I      intronic
chr19:46082603(-) A-I      intronic
chr19:46082658(-) A-I      intronic
chr19:46082661(-) A-I      intronic
chr19:46082706(-) A-I      intronic
chr19:46083260(-) A-I      intronic
chr19:46083266(-) A-I      intronic
chr19:46083370(-) A-I      intronic
chr19:46083383(-) A-I      intronic
chr19:46083392(-) A-I      intronic
chr19:46083393(-) A-I      intronic
chr19:46083614(-) A-I      intronic
chr19:46083644(-) A-I      intronic
chr19:46068228(-) A-I      intronic
chr19:46068310(-) A-I      intronic
chr19:46068828(-) A-I      intronic
chr19:46068963(-) A-I      intronic
chr19:46069015(-) A-I      intronic
chr19:46069967(-) A-I      intronic
chr19:46070004(-) A-I      intronic
chr19:46070354(-) A-I      intronic
chr19:46070516(-) A-I      intronic
chr19:46070519(-) A-I      intronic
chr19:46078562(-) A-I      intronic
chr19:46078552(-) A-I      intronic
chr19:46078525(-) A-I      intronic
chr19:46078466(-) A-I      intronic
chr19:46074656(-) A-I      intronic
chr19:46062227(-) A-I      intronic
chr19:46062239(-) A-I      intronic
chr19:46062345(-) A-I      intronic
chr19:46062437(-) A-I      intronic
chr19:46062748(-) A-I      intronic
chr19:46062762(-) A-I      intronic
chr19:46062839(-) A-I      intronic
chr19:46062898(-) A-I      intronic
chr19:46064443(-) A-I      intronic
chr19:46074606(-) A-I      intronic
chr19:46074470(-) A-I      intronic
chr19:46074462(-) A-I      intronic
chr19:46074435(-) A-I      intronic
chr19:46074074(-) A-I      intronic
chr19:46053277(-) A-I      3'UTR
chr19:46052854(-) A-I      3'UTR
chr19:46053354(-) A-I      3'UTR
chr19:46054351(-) A-I      3'UTR
chr19:46054396(-) A-I      3'UTR
chr19:46054496(-) A-I      3'UTR
chr19:46054497(-) A-I      3'UTR
chr19:46055562(-) A-I      3'UTR
chr19:46055587(-) A-I      3'UTR
chr19:46055614(-) A-I      3'UTR
chr19:46055634(-) A-I      3'UTR
chr19:46055644(-) A-I      3'UTR
chr19:46055819(-) A-I      3'UTR
chr19:46055844(-) A-I      3'UTR
chr19:46055885(-) A-I      3'UTR
chr19:46056104(-) A-I      3'UTR
chr19:46056110(-) A-I      3'UTR
chr19:46056113(-) A-I      3'UTR
chr19:46056098(-) A-I      3'UTR
chr19:46049819(-) A-I      3'UTR
chr19:46052097(-) A-I      3'UTR
chr19:46052190(-) A-I      3'UTR
chr19:46056161(-) A-I      3'UTR
chr19:46052335(-) A-I      3'UTR
chr19:46052342(-) A-I      3'UTR
chr19:46055938(-) A-I      3'UTR
chr19:46052811(-) A-I      3'UTR
chr19:46052836(-) A-I      3'UTR
chr19:46052344(-) A-I      3'UTR
chr19:46052867(-) A-I      3'UTR
chr19:46052906(-) A-I      3'UTR
chr19:46052909(-) A-I      3'UTR
chr19:46052913(-) A-I      3'UTR
chr19:46053199(-) A-I      3'UTR
chr19:46069165(-) A-I      intronic
chr19:46076627(-) A-I      intronic
chr19:46070005(-) A-I      intronic
chr19:46070592(-) A-I      intronic
chr19:46078544(-) A-I      intronic
chr19:46068990(-) A-I      intronic
chr19:46048703(-) A-I      intronic
chr19:46036235(-) A-I      intronic
chr19:46041638(-) A-I      intronic
chr19:46046593(-) A-I      intronic
chr19:46065457(-) A-I      intronic
chr19:46042679(-) A-I      intronic
chr19:46038703(-) A-I      intronic
chr19:46038168(-) A-I      intronic
chr19:46079623(-) A-I      intronic
chr19:46046716(-) A-I      intronic
chr19:46068317(-) A-I      intronic
chr19:46069572(-) A-I      intronic
chr19:46074119(-) A-I      intronic
chr19:46040611(-) A-I      intronic
chr19:46069867(-) A-I      intronic
chr19:46041315(-) A-I      intronic
chr19:46071537(-) A-I      intronic
chr19:46068320(-) A-I      intronic
chr19:46082752(-) A-I      intronic
chr19:46074431(-) A-I      intronic
chr19:46038889(-) A-I      intronic
chr19:46078545(-) A-I      intronic
chr19:46078622(-) A-I      intronic
chr19:46074061(-) A-I      intronic
chr19:46076597(-) A-I      intronic
chr19:46079399(-) A-I      intronic
chr19:46061507(-) A-I      intronic
chr19:46085234(-) A-I      intronic
chr19:46058253(-) A-I      intronic
chr19:46069018(-) A-I      intronic
chr19:46058648(-) A-I      intronic
chr19:46046711(-) A-I      intronic
chr19:46039793(-) A-I      intronic
chr19:46072551(-) A-I      intronic
chr19:46039365(-) A-I      intronic
chr19:46074432(-) A-I      intronic
chr19:46073823(-) A-I      intronic
chr19:46041270(-) A-I      intronic
chr19:46039636(-) A-I      intronic
chr19:46041761(-) A-I      intronic
chr19:46070498(-) A-I      intronic
chr19:46079532(-) A-I      intronic
chr19:46069897(-) A-I      intronic
chr19:46046406(-) A-I      intronic
chr19:46043718(-) A-I      intronic
chr19:46042847(-) A-I      intronic
chr19:46079714(-) A-I      intronic
chr19:46037671(-) A-I      intronic
chr19:46038652(-) A-I      intronic
chr19:46061335(-) A-I      intronic
chr19:46066556(-) A-I      intronic
chr19:46058732(-) A-I      intronic
chr19:46041859(-) A-I      intronic
chr19:46074539(-) A-I      intronic
chr19:46081920(-) A-I      intronic
chr19:46079063(-) A-I      intronic
chr19:46069173(-) A-I      intronic
chr19:46046998(-) A-I      intronic
chr19:46072595(-) A-I      intronic
chr19:46038162(-) A-I      intronic
chr19:46037641(-) A-I      intronic
chr19:46038797(-) A-I      intronic
chr19:46033367(-) A-I      intronic
chr19:46043418(-) A-I      intronic
chr19:46038835(-) A-I      intronic
chr19:46053232(-) A-I      3'UTR
chr19:46052902(-) A-I      3'UTR
chr19:46085558(-) A-I      intronic
chr19:46052200(-) A-I      3'UTR
chr19:46065705(-) A-I      intronic
chr19:46066952(-) A-I      intronic
chr19:46053308(-) A-I      3'UTR
chr19:46050222(-) A-I      3'UTR
chr19:46052989(-) A-I      3'UTR
chr19:46039101(-) A-I      intronic
chr19:46052916(-) A-I      3'UTR
chr19:46030721(-) A-I      3'UTR
chr19:46076626(-) A-I      intronic
chr19:46056206(-) A-I      3'UTR
chr19:46056171(-) A-I      3'UTR
chr19:46053218(-) A-I      3'UTR
chr19:46062415(-) A-I      intronic
chr19:46043953(-) A-I      intronic
chr19:46066515(-) A-I      intronic
chr19:46039780(-) A-I      intronic
chr19:46050154(-) A-I      3'UTR
chr19:46046778(-) A-I      intronic
chr19:46050094(-) A-I      3'UTR
chr19:46053224(-) A-I      3'UTR
chr19:46052352(-) A-I      3'UTR
chr19:46050061(-) A-I      3'UTR
chr19:46039033(-) A-I      intronic
chr19:46062775(-) A-I      intronic
chr19:46053233(-) A-I      3'UTR
chr19:46052908(-) A-I      3'UTR
chr19:46053407(-) A-I      3'UTR
chr19:46050178(-) A-I      3'UTR
chr19:46040258(-) A-I      intronic
chr19:46048537(-) A-I      intronic
chr19:46056002(-) A-I      3'UTR
chr19:46053159(-) A-I      3'UTR
chr19:46037987(-) A-I      intronic
chr19:46045042(-) A-I      intronic
chr19:46053304(-) A-I      3'UTR
chr19:46053370(-) A-I      3'UTR
chr19:46033169(-) A-I      intronic
chr19:46052975(-) A-I      3'UTR
chr19:46053172(-) A-I      3'UTR
chr19:46046831(-) A-I      intronic
chr19:46052835(-) A-I      3'UTR
chr19:46069187(-) A-I      intronic
chr19:46055911(-) A-I      3'UTR
chr19:46054254(-) A-I      3'UTR
chr19:46053334(-) A-I      3'UTR
chr19:46055889(-) A-I      3'UTR
chr19:46053347(-) A-I      3'UTR
chr19:46079357(-) A-I      intronic
chr19:46052941(-) A-I      3'UTR
chr19:46039645(-) A-I      intronic
chr19:46056062(-) A-I      3'UTR
chr19:46052917(-) A-I      3'UTR
chr19:46053211(-) A-I      3'UTR
chr19:46033100(-) A-I      intronic
chr19:46040227(-) A-I      intronic
chr19:46043320(-) A-I      intronic
chr19:46048727(-) A-I      intronic
chr19:46087030(-) A-I      intronic
chr19:46076657(-) A-I      intronic
chr19:46079123(-) A-I      intronic
chr19:46081869(-) A-I      intronic
chr19:46049892(-) A-I      3'UTR
chr19:46051094(-) A-I      3'UTR
chr19:46085133(-) A-I      intronic
chr19:46048713(-) A-I      intronic
chr19:46084147(-) A-I      intronic
chr19:46062176(-) A-I      intronic
chr19:46033062(-) A-I      intronic
chr19:46085556(-) A-I      intronic
chr19:46043961(-) A-I      intronic
chr19:46054513(-) A-I      3'UTR
chr19:46046396(-) A-I      intronic
chr19:46040233(-) A-I      intronic
chr19:46050158(-) A-I      3'UTR
chr19:46030805(-) A-I      3'UTR
chr19:46041673(-) A-I      intronic
chr19:46055755(-) A-I      3'UTR
chr19:46042848(-) A-I      intronic
chr19:46087039(-) A-I      intronic
chr19:46053316(-) A-I      3'UTR
chr19:46037698(-) A-I      intronic
chr19:46055902(-) A-I      3'UTR
chr19:46056026(-) A-I      3'UTR
chr19:46053266(-) A-I      3'UTR
chr19:46036465(-) A-I      intronic
chr19:46036247(-) A-I      intronic
chr19:46033529(-) A-I      intronic
chr19:46058761(-) A-I      intronic
chr19:46030940(-) A-I      3'UTR
chr19:46078644(-) A-I      intronic
chr19:46052831(-) A-I      3'UTR
chr19:46037920(-) A-I      intronic
chr19:46056207(-) A-I      3'UTR
chr19:46052939(-) A-I      3'UTR
chr19:46062840(-) A-I      intronic
chr19:46052988(-) A-I      3'UTR
chr19:46056215(-) A-I      3'UTR
chr19:46055942(-) A-I      3'UTR
chr19:46055603(-) A-I      3'UTR
chr19:46052915(-) A-I      3'UTR
chr19:46079477(-) A-I      intronic
chr19:46079064(-) A-I      intronic
chr19:46055754(-) A-I      3'UTR
chr19:46065042(-) A-I      intronic
chr19:46046542(-) A-I      intronic
chr19:46053002(-) A-I      3'UTR
chr19:46054410(-) A-I      3'UTR
chr19:46044801(-) A-I      intronic
chr19:46042774(-) A-I      intronic
chr19:46041240(-) A-I      intronic
chr19:46053353(-) A-I      3'UTR
chr19:46038029(-) A-I      intronic
chr19:46033170(-) A-I      intronic
chr19:46053402(-) A-I      3'UTR
chr19:46069821(-) A-I      intronic
chr19:46066887(-) A-I      intronic
chr19:46040347(-) A-I      intronic
chr19:46062933(-) A-I      intronic
chr19:46042791(-) A-I      intronic
chr19:46044767(-) A-I      intronic
chr19:46047904(-) A-I      intronic
chr19:46054357(-) A-I      3'UTR
chr19:46054421(-) A-I      3'UTR
chr19:46053369(-) A-I      3'UTR
chr19:46037924(-) A-I      intronic
chr19:46079544(-) A-I      intronic
chr19:46053267(-) A-I      3'UTR
chr19:46055542(-) A-I      3'UTR
chr19:46085230(-) A-I      intronic
chr19:46047903(-) A-I      intronic
chr19:46055630(-) A-I      3'UTR
chr19:46046529(-) A-I      intronic
chr19:46039387(-) A-I      intronic
chr19:46052876(-) A-I      3'UTR
chr19:46054503(-) A-I      3'UTR
chr19:46078458(-) A-I      intronic
chr19:46064509(-) A-I      intronic
chr19:46053258(-) A-I      3'UTR
chr19:46069171(-) A-I      intronic
chr19:46033167(-) A-I      intronic
chr19:46040469(-) A-I      intronic
chr19:46039684(-) A-I      intronic
chr19:46033086(-) A-I      intronic
chr19:46069493(-) A-I      intronic
chr19:46062827(-) A-I      intronic
chr19:46062934(-) A-I      intronic
chr19:46040602(-) A-I      intronic
chr19:46069635(-) A-I      intronic
chr19:46082025(-) A-I      intronic
chr19:46062714(-) A-I      intronic
chr19:46062843(-) A-I      intronic
chr19:46062956(-) A-I      intronic
chr19:46078962(-) A-I      intronic
chr19:46046249(-) A-I      intronic
chr19:46062940(-) A-I      intronic
chr19:46048552(-) A-I      intronic
chr19:46065704(-) A-I      intronic
chr19:46046424(-) A-I      intronic
chr19:46041841(-) A-I      intronic
chr19:46074624(-) A-I      intronic
chr19:46066695(-) A-I      intronic
chr19:46069732(-) A-I      intronic
chr19:46062244(-) A-I      intronic
chr19:46066514(-) A-I      intronic
chr19:46043985(-) A-I      intronic
chr19:46071333(-) A-I      intronic
chr19:46042915(-) A-I      intronic
chr19:46046365(-) A-I      intronic
chr19:46042863(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED OPA3
chr19:46054357(-) A-I exon 3'UTR    15258596   //22327324
chr19:46054421(-) A-I exon 3'UTR    15258596
chr19:46054470(-) A-I exon 3'UTR    15258596
chr19:46054503(-) A-I exon 3'UTR    15258596   //22327324
chr19:46052975(-) A-I exon 3'UTR    22327324
chr19:46053232(-) A-I exon 3'UTR    21960545   //22327324
chr19:46053253(-) A-I exon 3'UTR    22327324
chr19:46053316(-) A-I exon 3'UTR    21960545   //22327324
chr19:46053329(-) A-I exon 3'UTR    21960545   //22327324
chr19:46053340(-) A-I exon 3'UTR    22327324
chr19:46053359(-) A-I exon 3'UTR    22327324
chr19:46053369(-) A-I exon 3'UTR    22327324
chr19:46055604(-) A-I exon 3'UTR    22327324
chr19:46053195(-) A-I exon 3'UTR    21960545
chr19:46053266(-) A-I exon 3'UTR    21960545
chr19:46053267(-) A-I exon 3'UTR    21960545
chr19:46052831(-) A-G exon 3'UTR    21725310   //22484847
chr19:46052975(-) A-G exon 3'UTR    21725310   //22484847
chr19:46054357(-) A-G exon 3'UTR    21725310   //22484847
chr19:46054503(-) A-G exon 3'UTR    21725310   //22484847
chr19:46042679(-) A-G intron -    22484847
chr19:46050154(-) A-G exon 3'UTR    22484847
chr19:46050158(-) A-G exon 3'UTR    22484847
chr19:46052914(-) A-G exon 3'UTR    22484847
chr19:46052915(-) A-G exon 3'UTR    22484847
chr19:46052916(-) A-G exon 3'UTR    22484847
chr19:46052917(-) A-G exon 3'UTR    22484847
chr19:46052931(-) A-G exon 3'UTR    22484847
chr19:46052934(-) A-G exon 3'UTR    22484847
chr19:46052939(-) A-G exon 3'UTR    22484847
chr19:46052941(-) A-G exon 3'UTR    22484847
chr19:46052996(-) A-G exon 3'UTR    22484847
chr19:46053159(-) A-G exon 3'UTR    22484847
chr19:46053172(-) A-G exon 3'UTR    22484847
chr19:46053194(-) A-G exon 3'UTR    22484847
chr19:46053195(-) A-G exon 3'UTR    22484847
chr19:46053232(-) A-G exon 3'UTR    22484847
chr19:46053253(-) A-G exon 3'UTR    22484847
chr19:46053266(-) A-G exon 3'UTR    22484847
chr19:46053267(-) A-G exon 3'UTR    22484847
chr19:46053294(-) A-G exon 3'UTR    22484847
chr19:46053316(-) A-G exon 3'UTR    22484847
chr19:46053329(-) A-G exon 3'UTR    22484847
chr19:46053340(-) A-G exon 3'UTR    22484847
chr19:46053359(-) A-G exon 3'UTR    22484847
chr19:46053369(-) A-G exon 3'UTR    22484847
chr19:46053370(-) A-G exon 3'UTR    22484847
chr19:46053378(-) A-G exon 3'UTR    22484847
chr19:46053393(-) A-G exon 3'UTR    22484847
chr19:46053402(-) A-G exon 3'UTR    22484847
chr19:46053407(-) A-G exon 3'UTR    22484847
chr19:46054421(-) A-G exon 3'UTR    22484847
chr19:46055604(-) A-G exon 3'UTR    22484847
chr19:46055761(-) A-G exon 3'UTR    22484847
chr19:46055763(-) A-G exon 3'UTR    22484847
chr19:46055773(-) A-G exon 3'UTR    22484847
chr19:46055902(-) A-G exon 3'UTR    22484847
chr19:46055912(-) A-G exon 3'UTR    22484847
chr19:46056002(-) A-G exon 3'UTR    22484847
chr19:46056071(-) A-G exon 3'UTR    22484847
chr19:46065505(-) A-G intron -    22484847
chr19:46069867(-) A-G intron -    22484847
chr19:46074539(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase OPA3
chr19:46030882-46030883(-) m6A 3'UTR       27773535
chr19:46030906-46030907(-) m6A 3'UTR       27773535
chr19:46030959-46030960(-) m6A 3'UTR       27773535
chr19:46031201-46031202(-) m6A 3'UTR       24981863//27773535
chr19:46031254-46031255(-) m6A 3'UTR       24981863//27773535
chr19:46031358-46031359(-) m6A 3'UTR       24981863//27773535
chr19:46031423-46031424(-) m6A 3'UTR       24981863//27773535
chr19:46031726-46031727(-) m6A 3'UTR       24981863//27773535
chr19:46031790-46031791(-) m6A 3'UTR       24284625//24981863//27773535//22608085
chr19:46031821-46031822(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085
chr19:46031851-46031852(-) m6A 3'UTR       24284625//25456834//24981863//27773535
chr19:46031885-46031886(-) m6A 3'UTR       24284625//25456834//24981863//27773535
chr19:46031952-46031953(-) m6A 3'UTR       25456834//24981863//27773535
chr19:46032007-46032008(-) m6A 3'UTR       24981863//27773535
chr19:46032024-46032025(-) m6A 3'UTR       24981863//27773535
chr19:46032080-46032081(-) m6A 3'UTR       24981863//22608085
chr19:46032117-46032118(-) m6A 3'UTR       24981863//22608085
chr19:46032156-46032157(-) m6A 3'UTR       25456834//24981863//22608085
chr19:46032223-46032224(-) m6A 3'UTR       25456834//24981863//22608085
chr19:46032271-46032272(-) m6A 3'UTR       25456834//24981863//22608085
chr19:46032356-46032357(-) m6A CDS       25456834//24981863//22608085
chr19:46049790-46049791(-) m6A 3'UTR//intron       24981863
chr19:46049824-46049825(-) m6A 3'UTR//intron       24981863
chr19:46049849-46049850(-) m6A 3'UTR//intron       24981863
chr19:46050872-46050873(-) m6A 3'UTR//intron       24981863
chr19:46050895-46050896(-) m6A 3'UTR//intron       24981863
chr19:46050929-46050930(-) m6A 3'UTR//intron       24981863
chr19:46052360-46052361(-) m6A 3'UTR//intron       24981863
chr19:46052652-46052653(-) m6A 3'UTR//intron       24284625//25456834//24981863//27371828//27773536//22608085
chr19:46052727-46052728(-) m6A 3'UTR//intron       24284625//25456834//24981863//27371828//27773536//22608085
chr19:46052745-46052746(-) m6A 3'UTR//intron       24284625//25456834//24981863//27371828//27773536//22608085
chr19:46052765-46052766(-) m6A 3'UTR//intron       24284625//25456834//24981863//27371828//27773536//22608085
chr19:46052834-46052835(-) m6A 3'UTR//intron       24209618//25456834//24981863//27371828//27773536
chr19:46052930-46052931(-) m6A 3'UTR//intron       24209618
chr19:46052953-46052954(-) m6A 3'UTR//intron       24209618
chr19:46052981-46052982(-) m6A 3'UTR//intron       24209618
chr19:46053042-46053043(-) m6A 3'UTR//intron       24981863
chr19:46053078-46053079(-) m6A 3'UTR//intron       24209618//24981863//27773535
chr19:46053128-46053129(-) m6A 3'UTR//intron       24209618//24981863
chr19:46053210-46053211(-) m6A 3'UTR//intron       24209618
chr19:46053712-46053713(-) m6A 3'UTR//intron       27773535
chr19:46053874-46053875(-) m6A 3'UTR//intron       24981863//27773535
chr19:46053899-46053900(-) m6A 3'UTR//intron       24981863//27773535
chr19:46053953-46053954(-) m6A 3'UTR//intron       27773535
chr19:46054437-46054438(-) m6A 3'UTR//intron       24981863
chr19:46054477-46054478(-) m6A 3'UTR//intron       24981863
chr19:46054594-46054595(-) m6A 3'UTR//intron       24284625//27773535
chr19:46054631-46054632(-) m6A 3'UTR//intron       27773535
chr19:46054648-46054649(-) m6A 3'UTR//intron       27773535
chr19:46054670-46054671(-) m6A 3'UTR//intron       27773535
chr19:46054725-46054726(-) m6A 3'UTR//intron       27773535
chr19:46055056-46055057(-) m6A 3'UTR//intron       27773535
chr19:46055158-46055159(-) m6A 3'UTR//intron       27773535
chr19:46055394-46055395(-) m6A 3'UTR//intron       27773535
chr19:46055408-46055409(-) m6A 3'UTR//intron       27773535
chr19:46055419-46055420(-) m6A 3'UTR//intron       27773535
chr19:46055477-46055478(-) m6A 3'UTR//intron       27773535
chr19:46055493-46055494(-) m6A 3'UTR//intron       27773535
chr19:46055658-46055659(-) m6A 3'UTR//intron       25456834
chr19:46055681-46055682(-) m6A 3'UTR//intron       25456834
chr19:46055810-46055811(-) m6A 3'UTR//intron       24284625//25456834//24981863//27773535//22608085
chr19:46055869-46055870(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22608085
chr19:46055947-46055948(-) m6A 3'UTR//intron       24284625//24209618//24981863//27773535
chr19:46055960-46055961(-) m6A 3'UTR//intron       24209618//24981863//27773535
chr19:46056029-46056030(-) m6A 3'UTR//intron       24209618//24981863
chr19:46056126-46056127(-) m6A 3'UTR//intron       24209618//24981863
chr19:46056149-46056150(-) m6A 3'UTR//intron       24209618
chr19:46056341-46056342(-) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22608085
chr19:46056371-46056372(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22608085
chr19:46056392-46056393(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22608085
chr19:46056470-46056471(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr19:46056504-46056505(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr19:46056537-46056538(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr19:46056603-46056604(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr19:46056676-46056677(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr19:46056742-46056743(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr19:46056754-46056755(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr19:46056858-46056859(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085
chr19:46057145-46057146(-) m6A CDS//intron       24284625//24209618//27773536//22608085
chr19:46087907-46087908(-) m6A CDS//intron       24284625//24981863//27773535
chr19:46088030-46088031(-) m6A 5'UTR//intron       24284625//24981863
chr19:46093185-46093186(-) m6A intron       -
chr19:46093231-46093232(-) m6A intron       -
chr19:46093257-46093258(-) m6A intron       -
chr19:46093285-46093286(-) m6A intron       -
chr19:46093305-46093306(-) m6A intron       -
chr19:46093330-46093331(-) m6A intron       -
chr19:46093337-46093338(-) m6A intron       -
chr19:46093914-46093915(-) m6A intron       -
chr19:46094034-46094035(-) m6A intron       -
chr19:46094072-46094073(-) m6A intron       24209618
chr19:46094129-46094130(-) m6A intron       -
chr19:46094151-46094152(-) m6A intron       -
chr19:46094279-46094280(-) m6A intron       -
chr19:46094354-46094355(-) m6A intron       -
chr19:46094900-46094901(-) m6A intron       -
chr19:46094951-46094952(-) m6A intron       -
chr19:46095077-46095078(-) m6A intron       24209618
chr19:46095089-46095090(-) m6A intron       24209618
chr19:46095830-46095831(-) m6A intron       -
chr19:46095847-46095848(-) m6A intron       -
chr19:46095900-46095901(-) m6A intron       -
chr19:46095935-46095936(-) m6A intron       -
chr19:46102917-46102918(-) m6A intron       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate OPA3
Chromatin K562 cells     -
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Exosome Blood     -
Membrane HCC cell line (HepG2)     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H3-3p
Interactor2: OPA3

Evidence Support:


Prediction-Evidence cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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