Detail

Basic Information:

VIRBase ID:

VHID00085097

Virus:

Human alphaherpesvirus 1 (HSV-1)

Host:

Homo sapiens

Confidence Score:

0.2381

Interaction Type:

Virus-Host interaction

Predicted Binding:

*It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H3-3p	CCDC87
miRBase Accession/Entrez ID	MIMAT0008400	55231
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource

Symbol

ModificationPosition

Type

Genomic Context

PMID

RMBase

CCDC87

chr11:66357747-66357748(-)	m6A	3'UTR	24981863//27773535
chr11:66357753-66357754(-)	m6A	3'UTR	24981863//27773535
chr11:66357784-66357785(-)	m6A	3'UTR	24981863//27773535
chr11:66357845-66357846(-)	m6A	3'UTR	24981863//27773535
chr11:66358257-66358258(-)	m6A	CDS	-
chr11:66358275-66358276(-)	m6A	CDS	24981863
chr11:66358387-66358388(-)	m6A	CDS	24981863
chr11:66358396-66358397(-)	m6A	CDS	24981863
chr11:66358431-66358432(-)	m6A	CDS	24981863
chr11:66358546-66358547(-)	m6A	CDS	27773535
chr11:66358551-66358552(-)	m6A	CDS	27773535
chr11:66358670-66358671(-)	m6A	CDS	27773535
chr11:66358747-66358748(-)	m6A	CDS	27773535
chr11:66358825-66358826(-)	m6A	CDS	24981863//27773535
chr11:66358845-66358846(-)	m6A	CDS	24981863//27773535
chr11:66358878-66358879(-)	m6A	CDS	24981863//27773535
chr11:66358921-66358922(-)	m6A	CDS	27773535
chr11:66359070-66359071(-)	m6A	CDS	24981863
chr11:66359122-66359123(-)	m6A	CDS	24981863
chr11:66359131-66359132(-)	m6A	CDS	24981863
chr11:66359242-66359243(-)	m6A	CDS	27773536
chr11:66359275-66359276(-)	m6A	CDS	27773536

RNA Localization:

Resource

Symbol

Subcellular Localization

Tissue or Cell Line