Basic Information:

  VIRBase ID:  

VHID00085051

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H3-3p:  MIMAT0008400          C14orf119:  NM_017924     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H3-3p	C14orf119
miRBase Accession/Entrez ID	MIMAT0008400	55017
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	C14orf119	chr14:23565927(+) A-I      intronic chr14:23569290(+) A-I      3'UTR chr14:23569288(+) A-I      3'UTR chr14:23569289(+) A-I      3'UTR chr14:23565634(+) A-I      intronic chr14:23565976(+) A-I      intronic chr14:23566048(+) A-I      intronic chr14:23565605(+) A-I      intronic chr14:23565903(+) A-I      intronic chr14:23565919(+) A-I      intronic chr14:23565565(+) A-I      intronic chr14:23565673(+) A-I      intronic chr14:23565566(+) A-I      intronic chr14:23568873(+) A-I      3'UTR chr14:23569342(+) A-I      3'UTR chr14:23569348(+) A-I      3'UTR chr14:23569317(+) A-I      3'UTR chr14:23569409(+) A-I      3'UTR chr14:23568886(+) A-I      3'UTR chr14:23567988(+) A-I      3'UTR chr14:23567904(+) A-I      3'UTR chr14:23568898(+) A-I      3'UTR chr14:23568004(+) A-I      3'UTR chr14:23568872(+) A-I      3'UTR chr14:23568790(+) A-I      3'UTR chr14:23565506(+) A-I      intronic chr14:23565479(+) A-I      intronic chr14:23565462(+) A-I      intronic chr14:23565668(+) A-I      intronic chr14:23565613(+) A-I      intronic chr14:23565885(+) A-I      intronic chr14:23565898(+) A-I      intronic chr14:23565952(+) A-I      intronic chr14:23565960(+) A-I      intronic chr14:23566020(+) A-I      intronic chr14:23565564(+) A-I      intronic chr14:23565969(+) A-I      intronic chr14:23565581(+) A-I      intronic chr14:23565951(+) A-I      intronic chr14:23566007(+) A-I      intronic chr14:23565550(+) A-I      intronic chr14:23565948(+) A-I      intronic chr14:23566025(+) A-I      intronic chr14:23568887(+) A-I      3'UTR chr14:23568793(+) A-I      3'UTR chr14:23568868(+) A-I      3'UTR chr14:23567970(+) A-I      3'UTR chr14:23569259(+) A-I      3'UTR chr14:23569405(+) A-I      3'UTR chr14:23569403(+) A-I      3'UTR chr14:23569270(+) A-I      3'UTR chr14:23567974(+) A-I      3'UTR chr14:23569416(+) A-I      3'UTR chr14:23569378(+) A-I      3'UTR chr14:23568848(+) A-I      3'UTR chr14:23568167(+) A-I      3'UTR chr14:23567951(+) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	C14orf119	chr14:23566025(+) A-I intron -    22327324 chr14:23567904(+) A-I intron -    21960545 chr14:23568167(+) A-I intron -    21960545 chr14:23566020(+) A-G intron -    22484847 chr14:23566025(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	C14orf119	chr14:23564029-23564030(+) m6A 5'UTR       24981863 chr14:23564448-23564449(+) m6A 5'UTR       24284625//24981863//27773535//22608085 chr14:23564604-23564605(+) m6A 5'UTR       24981863//27773535 chr14:23564653-23564654(+) m6A 5'UTR       24981863//27773535 chr14:23564786-23564787(+) m6A 5'UTR       24284625//24209618//24981863//22575960//22608085 chr14:23567045-23567046(+) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr14:23567123-23567124(+) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr14:23567214-23567215(+) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr14:23567237-23567238(+) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr14:23567285-23567286(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr14:23567301-23567302(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr14:23567384-23567385(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr14:23567409-23567410(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr14:23567463-23567464(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr14:23567588-23567589(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr14:23567642-23567643(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr14:23567664-23567665(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr14:23567669-23567670(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr14:23567762-23567763(+) m6A 3'UTR       24284625//24981863//27773535//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	C14orf119	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleus Nasopharyngeal carcinoma cells     20498841 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H3-3p
Interactor2: C14orf119

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg