Detail Information

Basic Information:


  VIRBase ID:  

VHID00084939

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H3-3p:           GNG13:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H3-3p GNG13
miRBase
Accession/Entrez ID
MIMAT0008400 51764
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - G(gamma)13//h2-35

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase GNG13
chr16:848042-848043(-) m6A 3'UTR       -
chr16:848095-848096(-) m6A 3'UTR       -
chr16:848197-848198(-) m6A 3'UTR       -
chr16:848231-848232(-) m6A 3'UTR       -
chr16:848265-848266(-) m6A 3'UTR       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate GNG13
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H3-3p
Interactor2: GNG13

Evidence Support:


Prediction-Evidence cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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